RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 NLRC5Q86WI3 1866 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 PI4K2BG5E9Z4 385 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 ENPP3O14638 875 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 GPR37L1O60883 481 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 LINC00271P0C7V0 271 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 GHRP10912 638 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 KCNA5P22460 613 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 BMP2KLQ5H9B9 411 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 APOA5Q6Q788 366 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 HEATR3Q7Z4Q2 680 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 MICU3Q86XE3 530 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 FAM178BQ8IXR5 827 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 PABPC5Q96DU9 382 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 GLT8D2Q9H1C3 349 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 NSUN3Q9H649 340 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 EPHX3Q9H6B9 360 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 RIC8AQ9NPQ8 531 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 ANO2Q9NQ90 1003 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 SLC9A2Q9UBY0 812 aa20.01■□□□□ 0.79
SNRPA1-202ENST00000394082 MARK3P27448 753 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 SLC26A2P50443 739 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 RCAN1P53805 252 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 EXOSC10Q01780 885 aaKnown RBP20■□□□□ 0.79
SNRPA1-202ENST00000394082 FUT2Q10981 343 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 IER5Q5VY09 327 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 CCDC82Q8N4S0 544 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 DNAJB3Q8WWF6 145 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 ZNF689Q96CS4 500 aaPredicted RBP20■□□□□ 0.79
SNRPA1-202ENST00000394082 NEK1Q96PY6 1258 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 PCYT2Q99447 389 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 C11orf84Q9BUA3 381 aaPredicted RBP20■□□□□ 0.79
SNRPA1-202ENST00000394082 FTHL17Q9BXU8 183 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 AZI2Q9H6S1 392 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 TTC3P53804 2025 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 ADGRA3Q8IWK6 1321 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 CNTNAP5Q8WYK1 1306 aa20■□□□□ 0.79
SNRPA1-202ENST00000394082 hCG_1642624A0A1W2PR95 340 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 GRXCR2A6NFK2 248 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 ATG7O95352 703 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 INSRRP14616 1297 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 BMPR1AP36894 532 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 IRX6P78412 446 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 MRPS6P82932 125 aaKnown RBP19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 CEP55Q53EZ4 464 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 TMEM31Q5JXX7 168 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 WWC2Q6AWC2 1192 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 NIPA1Q7RTP0 329 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 CRIPAKQ8N1N5 446 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 SDF4Q9BRK5 362 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 LRFN3Q9BTN0 628 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 PLVAPQ9BX97 442 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 LRRC2Q9BYS8 371 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 PCDHA2Q9Y5H9 948 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 CDY2AQ9Y6F7 541 aa19.99■□□□□ 0.79
SNRPA1-202ENST00000394082 RBAK-RBAKDNI3L0D1 243 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 DGKIO75912 1065 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 PLA2G5P39877 138 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 NAPAP54920 295 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 AP3B2Q13367 1082 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 PTCRAQ6ISU1 281 aaPredicted RBP19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 DHX32Q7L7V1 743 aaKnown RBP19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 GJD3Q8N144 294 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 NME8Q8N427 588 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 CD320Q9NPF0 282 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 FAM50BQ9Y247 325 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 KDM3AQ9Y4C1 1321 aa19.98■□□□□ 0.79
SNRPA1-202ENST00000394082 MEIS1O00470 390 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 ZBTB43O43298 467 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 CTNNB1P35222 781 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 SREBF1P36956 1147 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 CLK2P49760 499 aaKnown RBP19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 STAT5BP51692 787 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 ACTR2P61160 394 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 RTN1Q16799 776 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 NAALADL2Q58DX5 795 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 TCEAL5Q5H9L2 206 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 TYW1BQ6NUM6 668 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 RAB11FIP4Q86YS3 637 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 CYP2W1Q8TAV3 490 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 AGO4Q9HCK5 861 aaKnown RBP19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 BARHL2Q9NY43 387 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 PKD2L1Q9P0L9 805 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 PRKAG3Q9UGI9 489 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 RAPGEFL1Q9UHV5 662 aa19.97■□□□□ 0.79
SNRPA1-202ENST00000394082 IGKV6D-21A0A0A0MT36 114 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 SMIM35A0A1B0GVV1 85 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 M0QZ92 97 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 ADCY7P51828 1080 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 KRT32Q14532 448 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 PLCB4Q15147 1175 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 CTC1Q2NKJ3 1217 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 KHSRPQ92945 711 aaKnown RBP eCLIP19.96■□□□□ 0.797e-7■■■□□ 16
SNRPA1-202ENST00000394082 P2RX5Q93086 422 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 ANO3Q9BYT9 981 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 AGO3Q9H9G7 860 aaKnown RBP19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 TRPV2Q9Y5S1 764 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 IGSF9BQ9UPX0 1349 aa19.96■□□□□ 0.79
SNRPA1-202ENST00000394082 STXBP3O00186 592 aa19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 HMGB1P09429 215 aaKnown RBP19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 ARP10275 920 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms