RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 ARID5AQ03989 594 aa16.2■□□□□ 0.18
CDH16-202ENST00000394055 GFPT1Q06210 699 aaPredicted RBP16.2■□□□□ 0.18
CDH16-202ENST00000394055 LRCH2Q5VUJ6 765 aa16.2■□□□□ 0.18
CDH16-202ENST00000394055 EHBP1Q8NDI1 1231 aa16.2■□□□□ 0.18
CDH16-202ENST00000394055 MMS19Q96T76 1030 aa16.2■□□□□ 0.18
CDH16-202ENST00000394055 CAPN6Q9Y6Q1 641 aa16.2■□□□□ 0.18
CDH16-202ENST00000394055 NOL4O94818 638 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 CYP3A4P08684 503 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 POLD1P28340 1107 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
CDH16-202ENST00000394055 HOXD13P35453 343 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 EPS15P42566 896 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 KCNA1Q09470 495 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 NBPF9Q3BBW0 867 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 IKZF4Q9H2S9 585 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 VCPKMTQ9H867 229 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 CETN3O15182 167 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 MOCS3O95396 460 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 LONRF2Q1L5Z9 754 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 FOXR2Q6PJQ5 311 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 DYDC2Q96IM9 177 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 JADE2Q9NQC1 790 aa16.19■□□□□ 0.18
CDH16-202ENST00000394055 SLC26A4O43511 780 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 TBCAO75347 108 aaKnown RBP16.18■□□□□ 0.18
CDH16-202ENST00000394055 GCNT3O95395 438 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 KCNA3P22001 575 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 TERF2Q15554 542 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 ZNF662Q6ZS27 426 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 CHURC1Q8WUH1 139 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 PSMD1Q99460 953 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
CDH16-202ENST00000394055 PKD2L1Q9P0L9 805 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 CCDC151A5D8V7 595 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 USO1O60763 962 aaKnown RBP16.18■□□□□ 0.18
CDH16-202ENST00000394055 GNA14O95837 355 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 VSNL1P62760 191 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 KNOP1Q1ED39 458 aaKnown RBP16.18■□□□□ 0.18
CDH16-202ENST00000394055 OTOP1Q7RTM1 612 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 PURBQ96QR8 312 aaKnown RBP16.18■□□□□ 0.18
CDH16-202ENST00000394055 SUGCTQ9HAC7 445 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 TLR2O60603 784 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 CAP2P40123 477 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 MAGEA1P43355 309 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 KCNH2Q12809 1159 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 DGKZQ13574 1117 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 RAPGEF1Q13905 1077 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 PAPD7Q5XG87 772 aaKnown RBP16.18■□□□□ 0.18
CDH16-202ENST00000394055 LDHDQ86WU2 507 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 NIM1KQ8IY84 436 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 MSANTD4Q8NCY6 345 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 FUT8Q9BYC5 575 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 SH2D4AQ9H788 454 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 CEP72Q9P209 647 aa16.18■□□□□ 0.18
CDH16-202ENST00000394055 ERICH4A6NGS2 130 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 CLIC2O15247 247 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 POLR3GO15318 223 aaPredicted RBP16.17■□□□□ 0.18
CDH16-202ENST00000394055 EYA4O95677 639 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 ARP10275 920 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 ACTN1P12814 892 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 DCAF17Q5H9S7 520 aaPredicted RBP16.17■□□□□ 0.18
CDH16-202ENST00000394055 HGSNATQ68CP4 663 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 POTEAQ6S8J7 498 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 CAGE1Q8TC20 777 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 AGBL1Q96MI9 1066 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 PSMB7Q99436 277 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 POLR3CQ9BUI4 534 aaPredicted RBP16.17■□□□□ 0.18
CDH16-202ENST00000394055 SYNPO2Q9UMS6 1093 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 DDX39AO00148 427 aaKnown RBP16.17■□□□□ 0.18
CDH16-202ENST00000394055 GAS7O60861 476 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 PSMD10O75832 226 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 SLITRK3O94933 977 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 RASSF7Q02833 373 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 BRD3Q15059 726 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 EDRF1Q3B7T1 1238 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 SFMBT2Q5VUG0 894 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 RINT1Q6NUQ1 792 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 TSGA10Q9BZW7 698 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 SALL4Q9UJQ4 1053 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 ZNRF3Q9ULT6 936 aa16.17■□□□□ 0.18
CDH16-202ENST00000394055 PSME4Q14997 1843 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 CASP4P49662 377 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 MARSP56192 900 aaKnown RBP16.16■□□□□ 0.18
CDH16-202ENST00000394055 CXCL9Q07325 125 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 TCERG1LQ5VWI1 586 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 EPM2AIP1Q7L775 607 aaPredicted RBP16.16■□□□□ 0.18
CDH16-202ENST00000394055 KSR1Q8IVT5 923 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 HSD17B14Q9BPX1 270 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 ZNF341Q9BYN7 854 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 ABCB6Q9NP58 842 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 MRPL11Q9Y3B7 192 aaKnown RBP16.16■□□□□ 0.18
CDH16-202ENST00000394055 PDE2AO00408 941 aaPredicted RBP16.16■□□□□ 0.18
CDH16-202ENST00000394055 WNT10BO00744 389 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 BUB1O43683 1085 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 AKAP3O75969 853 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 NMT1P30419 496 aaKnown RBP16.16■□□□□ 0.18
CDH16-202ENST00000394055 INPP5BP32019 993 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 CEP55Q53EZ4 464 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
CDH16-202ENST00000394055 FAM133AQ8N9E0 248 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms