RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SLITRK3O94933 977 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 EEPD1Q7L9B9 569 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 MTG1Q9BT17 334 aaPredicted RBP14.91□□□□□ -0.02
USP44-202ENST00000393091 FTOQ9C0B1 505 aaKnown RBP eCLIP14.91□□□□□ -0.02
USP44-202ENST00000393091 ANKEF1Q9NU02 776 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 PCDHA7Q9UN72 937 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 LTBP2Q14767 1821 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 LGALS2P05162 132 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 PSMC5P62195 406 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 TARBP2Q15633 366 aaKnown RBP14.91□□□□□ -0.02
USP44-202ENST00000393091 NFRKBQ6P4R8 1299 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 AFG1LQ8WV93 481 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 EIF2AK1Q9BQI3 630 aaKnown RBP14.91□□□□□ -0.02
USP44-202ENST00000393091 CUEDC2Q9H467 287 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 TCF7P36402 384 aaPredicted RBP14.91□□□□□ -0.02
USP44-202ENST00000393091 CDK7P50613 346 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 RBL2Q08999 1139 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 MIER3Q7Z3K6 550 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 RPAINQ86UA6 219 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 MAGEF1Q9HAY2 307 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 TCEAL9Q9UHQ7 104 aa14.91□□□□□ -0.02
USP44-202ENST00000393091 ATP4AP20648 1035 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 TXKP42681 527 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 STK38Q15208 465 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 ATP6V0A1Q93050 837 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 SPATA32Q96LK8 384 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 NT5C3AQ9H0P0 336 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 RPLP2P05387 115 aaKnown RBP14.9□□□□□ -0.02
USP44-202ENST00000393091 QARSP47897 775 aaKnown RBP14.9□□□□□ -0.02
USP44-202ENST00000393091 ZNF710Q8N1W2 664 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 LINC01465Q8N7H1 131 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 U2AF1L4Q8WU68 220 aaKnown RBP14.9□□□□□ -0.02
USP44-202ENST00000393091 BBXQ8WY36 941 aaPredicted RBP14.9□□□□□ -0.02
USP44-202ENST00000393091 PDLIM7Q9NR12 457 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 LRWD1Q9UFC0 647 aa14.9□□□□□ -0.02
USP44-202ENST00000393091 MYADML2A6NDP7 307 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 DYNC1LI2O43237 492 aaPredicted RBP14.89□□□□□ -0.03
USP44-202ENST00000393091 SHC4Q6S5L8 630 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 CCDC60Q8IWA6 550 aaPredicted RBP14.89□□□□□ -0.03
USP44-202ENST00000393091 EXOC8Q8IYI6 725 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 CSRNP2Q9H175 543 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 ZSWIM4Q9H7M6 989 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 ZNF302Q9NR11 478 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 ERAP1Q9NZ08 941 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 KCND2Q9NZV8 630 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 MBLAC1A4D2B0 266 aaPredicted RBP14.89□□□□□ -0.03
USP44-202ENST00000393091 TECP42680 631 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 ACLYP53396 1101 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 E2F4Q16254 413 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 PNMA5Q96PV4 448 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 STK17AQ9UEE5 414 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 ZNF215Q9UL58 517 aaPredicted RBP14.89□□□□□ -0.03
USP44-202ENST00000393091 KCNA10Q16322 511 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 ZNF484Q5JVG2 852 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 CATSPER3Q86XQ3 398 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 ATP8B4Q8TF62 1192 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 ZFP91Q96JP5 570 aaPredicted RBP14.89□□□□□ -0.03
USP44-202ENST00000393091 TIPINQ9BVW5 301 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 RNF208Q9H0X6 261 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 TELO2Q9Y4R8 837 aa14.89□□□□□ -0.03
USP44-202ENST00000393091 IGKV6-21A0A0C4DH24 114 aa14.88□□□□□ -0.03
USP44-202ENST00000393091 ZBTB42B2RXF5 422 aa14.88□□□□□ -0.03
USP44-202ENST00000393091 GRB10Q13322 594 aa14.88□□□□□ -0.03
USP44-202ENST00000393091 XKR3Q5GH77 459 aa14.88□□□□□ -0.03
USP44-202ENST00000393091 TFIP11Q9UBB9 837 aaKnown RBP14.88□□□□□ -0.03
USP44-202ENST00000393091 PLCB4Q15147 1175 aa14.88□□□□□ -0.03
USP44-202ENST00000393091 ZNF862O60290 1169 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 MED24O75448 989 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 STAT5BP51692 787 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 GRIN1Q05586 938 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 GJC2Q5T442 439 aaPredicted RBP14.87□□□□□ -0.03
USP44-202ENST00000393091 ANKRD33Q7Z3H0 272 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 RRN3P2A6NIE6 340 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 NOP56O00567 594 aaKnown RBP14.87□□□□□ -0.03
USP44-202ENST00000393091 GAS2O43903 313 aaKnown RBP14.87□□□□□ -0.03
USP44-202ENST00000393091 HBP1O60381 514 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 CAND2O75155 1236 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 OATP04181 439 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 PSEN2P49810 448 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 TIGD1Q96MW7 591 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 TOX2Q96NM4 488 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 GBP4Q96PP9 640 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 NACC1Q96RE7 527 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 WRAP73Q9P2S5 460 aaPredicted RBP14.87□□□□□ -0.03
USP44-202ENST00000393091 VWA3AA6NCI4 1184 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 POTEMA6NI47 508 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 ASGR1P07306 291 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 UGCGQ16739 394 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 KRT79Q5XKE5 535 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 ENGASEQ8NFI3 743 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 LENG1Q96BZ8 264 aaPredicted RBP14.87□□□□□ -0.03
USP44-202ENST00000393091 DEFB118Q96PH6 123 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 GRIN2DO15399 1336 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 NRCAMQ92823 1304 aa14.87□□□□□ -0.03
USP44-202ENST00000393091 A0A0U1RQG5 324 aaPredicted RBP14.86□□□□□ -0.03
USP44-202ENST00000393091 A0A1W2PQ45 241 aaPredicted RBP14.86□□□□□ -0.03
USP44-202ENST00000393091 A0A1W2PQY0 241 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 KBTBD13C9JR72 458 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 EYA4O95677 639 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 CNGA1P29973 690 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms