RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 RINT1Q6NUQ1 792 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 TPH2Q8IWU9 490 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 DESI2Q9BSY9 194 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 RUSC1Q9BVN2 902 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 OLFML3Q9NRN5 406 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 KCNH7Q9NS40 1196 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 ADAMTS5Q9UNA0 930 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 SSC5DA1L4H1 1573 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 CHMP2AO43633 222 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 RPS6P62753 249 aaKnown RBP22.2■■□□□ 1.14
PTPN11-202ENST00000392597 MEA1Q16626 185 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 BMT2Q1RMZ1 405 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 TKFCQ3LXA3 575 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 SFR1Q86XK3 245 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 TRERF1Q96PN7 1200 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 MAF1Q9H063 256 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 ZHX3Q9H4I2 956 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 ZHX2Q9Y6X8 837 aa22.2■■□□□ 1.14
PTPN11-202ENST00000392597 RASSF10A6NK89 507 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 POTEJP0CG39 1038 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 XRRA1Q6P2D8 792 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 IL31RAQ8NI17 732 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 ATG4CQ96DT6 458 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 JADE2Q9NQC1 790 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 HOMER2Q9NSB8 354 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 DNAI1Q9UI46 699 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 TRAF3IP3Q9Y228 551 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 SIK3Q9Y2K2 1263 aa22.19■■□□□ 1.14
PTPN11-202ENST00000392597 PRAMEF18Q5VWM3 479 aa22.18■■□□□ 1.14
PTPN11-202ENST00000392597 C1orf186Q6ZWK4 172 aa22.18■■□□□ 1.14
PTPN11-202ENST00000392597 SULF1Q8IWU6 871 aa22.18■■□□□ 1.14
PTPN11-202ENST00000392597 NELFCDQ8IXH7 590 aa22.18■■□□□ 1.14
PTPN11-202ENST00000392597 ZNF397Q8NF99 534 aaPredicted RBP22.18■■□□□ 1.14
PTPN11-202ENST00000392597 REPS2Q8NFH8 660 aa22.18■■□□□ 1.14
PTPN11-202ENST00000392597 DSG3P32926 999 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 HMGCS2P54868 508 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 MRPS9P82933 396 aaKnown RBP22.17■■□□□ 1.14
PTPN11-202ENST00000392597 KNOP1Q1ED39 458 aaKnown RBP22.17■■□□□ 1.14
PTPN11-202ENST00000392597 RNF207Q6ZRF8 634 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 PIGOQ8TEQ8 1089 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 MRPL44Q9H9J2 332 aaKnown RBP22.17■■□□□ 1.14
PTPN11-202ENST00000392597 AGO4Q9HCK5 861 aaKnown RBP22.17■■□□□ 1.14
PTPN11-202ENST00000392597 SEL1LQ9UBV2 794 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 MYPNQ86TC9 1320 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 PDXKO00764 312 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 ATP2A1O14983 1001 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 PGM5Q15124 567 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 CCDC40Q4G0X9 1142 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 PCMTD1Q96MG8 357 aaPredicted RBP22.17■■□□□ 1.14
PTPN11-202ENST00000392597 TAAR1Q96RJ0 339 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 TBC1D22BQ9NU19 505 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 ZNHIT6Q9NWK9 470 aaKnown RBP22.17■■□□□ 1.14
PTPN11-202ENST00000392597 CLEC11AQ9Y240 323 aa22.17■■□□□ 1.14
PTPN11-202ENST00000392597 COL11A1P12107 1806 aaPredicted RBP22.17■■□□□ 1.14
PTPN11-202ENST00000392597 CETN3O15182 167 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 NKRFO15226 690 aaKnown RBP eCLIP22.16■■□□□ 1.14
PTPN11-202ENST00000392597 EIF3DO15371 548 aaKnown RBP eCLIP22.16■■□□□ 1.14
PTPN11-202ENST00000392597 DHX15O43143 795 aaKnown RBP22.16■■□□□ 1.14
PTPN11-202ENST00000392597 CDK17Q00537 523 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 COG2Q14746 738 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 SLC30A10Q6XR72 485 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.16■■□□□ 1.14
PTPN11-202ENST00000392597 LXNQ9BS40 222 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 EDEM3Q9BZQ6 932 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 PXMP2Q9NR77 195 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 RNF146Q9NTX7 359 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 TMOD4Q9NZQ9 345 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 ODF2LQ9ULJ1 636 aa22.16■■□□□ 1.14
PTPN11-202ENST00000392597 FAM13AO94988 1023 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 CASP5P51878 434 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 GNG11P61952 73 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 MTMR1Q13613 665 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 WDR59Q6PJI9 974 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 MIER3Q7Z3K6 550 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 TRIM59Q8IWR1 403 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 ZFP91Q96JP5 570 aaPredicted RBP22.15■■□□□ 1.14
PTPN11-202ENST00000392597 RMDN3Q96TC7 470 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 PDCD2LQ9BRP1 358 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 AGPAT5Q9NUQ2 364 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 FAM184BQ9ULE4 1060 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 AFG3L2Q9Y4W6 797 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 EPN1Q9Y6I3 576 aaPredicted RBP22.15■■□□□ 1.14
PTPN11-202ENST00000392597 RSPH10B2B2RC85 870 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 CALUO43852 315 aaPredicted RBP22.15■■□□□ 1.14
PTPN11-202ENST00000392597 SLU7O95391 586 aaKnown RBP22.15■■□□□ 1.14
PTPN11-202ENST00000392597 P4HBP07237 508 aaKnown RBP22.15■■□□□ 1.14
PTPN11-202ENST00000392597 RSPH10BP0C881 870 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 HNRNPH3P31942 346 aaKnown RBP22.15■■□□□ 1.14
PTPN11-202ENST00000392597 KLK7P49862 253 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 ZNF131P52739 623 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 ADAM9Q13443 819 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 CATSPERGQ6ZRH7 1159 aa22.15■■□□□ 1.14
PTPN11-202ENST00000392597 RBM46Q8TBY0 533 aaKnown RBP22.15■■□□□ 1.14
PTPN11-202ENST00000392597 TYW1Q9NV66 732 aaKnown RBP22.15■■□□□ 1.14
PTPN11-202ENST00000392597 UBE4BO95155 1302 aa22.14■■□□□ 1.14
PTPN11-202ENST00000392597 KIF3CO14782 793 aa22.14■■□□□ 1.13
PTPN11-202ENST00000392597 NDUFA10O95299 355 aa22.14■■□□□ 1.13
PTPN11-202ENST00000392597 EIF2AK2P19525 551 aaKnown RBP22.14■■□□□ 1.13
PTPN11-202ENST00000392597 SH3D19Q5HYK7 790 aa22.14■■□□□ 1.13
PTPN11-202ENST00000392597 ZNF784Q8NCA9 323 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms