RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TGS1Q96RS0 853 aaKnown RBP18.96■□□□□ 0.63
PTPRK-208ENST00000392449 EHMT1Q9H9B1 1298 aa18.96■□□□□ 0.63
PTPRK-208ENST00000392449 SLC9A2Q9UBY0 812 aa18.96■□□□□ 0.63
PTPRK-208ENST00000392449 TUBE1Q9UJT0 475 aa18.96■□□□□ 0.63
PTPRK-208ENST00000392449 CLK2P49760 499 aaKnown RBP18.95■□□□□ 0.62
PTPRK-208ENST00000392449 METAP2P50579 478 aaKnown RBP eCLIP18.95■□□□□ 0.62
PTPRK-208ENST00000392449 FAM26DQ5JW98 314 aa18.95■□□□□ 0.62
PTPRK-208ENST00000392449 JAKMIP3Q5VZ66 844 aa18.95■□□□□ 0.62
PTPRK-208ENST00000392449 TRAPPC12Q8WVT3 735 aa18.95■□□□□ 0.62
PTPRK-208ENST00000392449 DNAJB3Q8WWF6 145 aa18.95■□□□□ 0.62
PTPRK-208ENST00000392449 KCNB2Q92953 911 aa18.95■□□□□ 0.62
PTPRK-208ENST00000392449 IFIH1Q9BYX4 1025 aaKnown RBP18.95■□□□□ 0.62
PTPRK-208ENST00000392449 TSPYL2Q9H2G4 693 aaPredicted RBP18.95■□□□□ 0.62
PTPRK-208ENST00000392449 SMARCAD1Q9H4L7 1026 aa18.95■□□□□ 0.62
PTPRK-208ENST00000392449 INSL6Q9Y581 213 aa18.95■□□□□ 0.62
PTPRK-208ENST00000392449 DDX39AO00148 427 aaKnown RBP18.94■□□□□ 0.62
PTPRK-208ENST00000392449 TNFRSF10AO00220 468 aa18.94■□□□□ 0.62
PTPRK-208ENST00000392449 HSPA4P34932 840 aa18.94■□□□□ 0.62
PTPRK-208ENST00000392449 ACTR2P61160 394 aa18.94■□□□□ 0.62
PTPRK-208ENST00000392449 HTRA4P83105 476 aaPredicted RBP18.94■□□□□ 0.62
PTPRK-208ENST00000392449 MGAT3Q09327 533 aa18.94■□□□□ 0.62
PTPRK-208ENST00000392449 CEP55Q53EZ4 464 aa18.94■□□□□ 0.62
PTPRK-208ENST00000392449 UHRF1Q96T88 793 aaPredicted RBP18.94■□□□□ 0.62
PTPRK-208ENST00000392449 FAM49AQ9H0Q0 323 aaPredicted RBP18.94■□□□□ 0.62
PTPRK-208ENST00000392449 AGO4Q9HCK5 861 aaKnown RBP18.94■□□□□ 0.62
PTPRK-208ENST00000392449 MBLAC1A4D2B0 266 aaPredicted RBP18.93■□□□□ 0.62
PTPRK-208ENST00000392449 MAFGO15525 162 aa18.93■□□□□ 0.62
PTPRK-208ENST00000392449 HMGB1P09429 215 aaKnown RBP18.93■□□□□ 0.62
PTPRK-208ENST00000392449 BMP1P13497 986 aa18.93■□□□□ 0.62
PTPRK-208ENST00000392449 INSRRP14616 1297 aa18.93■□□□□ 0.62
PTPRK-208ENST00000392449 SREBF1P36956 1147 aa18.93■□□□□ 0.62
PTPRK-208ENST00000392449 LPIN1Q14693 890 aa18.93■□□□□ 0.62
PTPRK-208ENST00000392449 IL27Q8NEV9 243 aa18.93■□□□□ 0.62
PTPRK-208ENST00000392449 TOP1MTQ969P6 601 aa18.93■□□□□ 0.62
PTPRK-208ENST00000392449 YME1L1Q96TA2 773 aa18.93■□□□□ 0.62
PTPRK-208ENST00000392449 LOXHD1Q8IVV2 1947 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 FAM86B1E9PN63 330 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 CCNE2O96020 404 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 FAM86B2P0C5J1 330 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 TMEM62Q0P6H9 643 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 PFKFB3Q16875 520 aaPredicted RBP18.92■□□□□ 0.62
PTPRK-208ENST00000392449 TAF2Q6P1X5 1199 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 BLOC1S2Q6QNY1 142 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 SP7Q8TDD2 431 aaPredicted RBP18.92■□□□□ 0.62
PTPRK-208ENST00000392449 PHKBQ93100 1093 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 SDF4Q9BRK5 362 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 TRPC6Q9Y210 931 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 CDY2AQ9Y6F7 541 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 NLRC5Q86WI3 1866 aa18.92■□□□□ 0.62
PTPRK-208ENST00000392449 NFASCO94856 1347 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 BRWD1Q9NSI6 2320 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 hCG_1984214I3L0E3 225 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 MEIS1O00470 390 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 FOSP01100 380 aaPredicted RBP18.91■□□□□ 0.62
PTPRK-208ENST00000392449 SCG2P13521 617 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 PLCB4Q15147 1175 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 PKN1Q16512 942 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 RPAINQ86UA6 219 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 ZNF713Q8N859 430 aaPredicted RBP18.91■□□□□ 0.62
PTPRK-208ENST00000392449 FBXO22Q8NEZ5 403 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 AZI2Q9H6S1 392 aa18.91■□□□□ 0.62
PTPRK-208ENST00000392449 RPS6KB1P23443 525 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 ZNF76P36508 570 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 RCAN1P53805 252 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 AP3B2Q13367 1082 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 RASGRP4Q8TDF6 673 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 AGO3Q9H9G7 860 aaKnown RBP18.9■□□□□ 0.62
PTPRK-208ENST00000392449 BDP1A6H8Y1 2624 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 STAT5BP51692 787 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 EPC2Q52LR7 807 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 FBXO47Q5MNV8 452 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 PLA2G4DQ86XP0 818 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 APBB2Q92870 758 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 HLA-CQ95604 372 aa18.9■□□□□ 0.62
PTPRK-208ENST00000392449 NCOA5Q9HCD5 579 aaKnown RBP18.9■□□□□ 0.62
PTPRK-208ENST00000392449 NID2Q14112 1375 aa18.89■□□□□ 0.61
PTPRK-208ENST00000392449 NCOR1O75376 2440 aa18.89■□□□□ 0.61
PTPRK-208ENST00000392449 IGLV3-22A0A075B6J6 115 aa18.89■□□□□ 0.61
PTPRK-208ENST00000392449 CD52P31358 61 aa18.89■□□□□ 0.61
PTPRK-208ENST00000392449 CCT2P78371 535 aaKnown RBP18.89■□□□□ 0.61
PTPRK-208ENST00000392449 MRPS6P82932 125 aaKnown RBP18.89■□□□□ 0.61
PTPRK-208ENST00000392449 RSPH3Q86UC2 560 aa18.89■□□□□ 0.61
PTPRK-208ENST00000392449 CRYGNQ8WXF5 182 aa18.89■□□□□ 0.61
PTPRK-208ENST00000392449 LINC01599Q8WXQ3 324 aa18.89■□□□□ 0.61
PTPRK-208ENST00000392449 COL4A6Q14031 1691 aa18.88■□□□□ 0.61
PTPRK-208ENST00000392449 CCDC196A0A1B0GTZ2 297 aa18.88■□□□□ 0.61
PTPRK-208ENST00000392449 RRN3P2A6NIE6 340 aa18.88■□□□□ 0.61
PTPRK-208ENST00000392449 DHX15O43143 795 aaKnown RBP18.88■□□□□ 0.61
PTPRK-208ENST00000392449 ATG7O95352 703 aa18.88■□□□□ 0.61
PTPRK-208ENST00000392449 NTRK3Q16288 839 aa18.88■□□□□ 0.61
PTPRK-208ENST00000392449 PLPPR4Q7Z2D5 763 aa18.88■□□□□ 0.61
PTPRK-208ENST00000392449 CCDC60Q8IWA6 550 aaPredicted RBP18.88■□□□□ 0.61
PTPRK-208ENST00000392449 LARP6Q9BRS8 491 aaKnown RBP18.88■□□□□ 0.61
PTPRK-208ENST00000392449 ZMYND12Q9H0C1 365 aa18.88■□□□□ 0.61
PTPRK-208ENST00000392449 COG5Q9UP83 839 aa18.88■□□□□ 0.61
PTPRK-208ENST00000392449 ATG2AQ2TAZ0 1938 aa18.88■□□□□ 0.61
PTPRK-208ENST00000392449 POTEB3A0JP26 581 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 ENPP3O14638 875 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 BACH1O14867 736 aa18.87■□□□□ 0.61
PTPRK-208ENST00000392449 PRPF3O43395 683 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms