RNA–Protein interactions for RNA: ENST00000391187.1

RNU6-1109P-201, Transcript of RNA, U6 small nuclear 1109, pseudogene, humanhuman

BASIC

Gene RNU6-1109P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1109P-201ENST00000391187 CLIP3Q96DZ5 547 aa3.9□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SLC39A2Q9NP94 309 aa3.9□□□□□ -1.79
RNU6-1109P-201ENST00000391187 TLR9Q9NR96 1032 aa3.9□□□□□ -1.79
RNU6-1109P-201ENST00000391187 NKRFO15226 690 aaKnown RBP eCLIP3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 CUTAO60888 179 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 RAMP2O60895 175 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 MSX2P35548 267 aaPredicted RBP3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 GRIA2P42262 883 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 TBR1Q16650 682 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PCSK4Q6UW60 755 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SGMS1Q86VZ5 419 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 FAM178BQ8IXR5 827 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 UHMK1Q8TAS1 419 aaKnown RBP3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 KCNJ15Q99712 375 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PDGFDQ9GZP0 370 aaPredicted RBP3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 ZNF703Q9H7S9 590 aaPredicted RBP3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SLC2A4RGQ9NR83 387 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 REXO2Q9Y3B8 237 aaKnown RBP3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 NUB1Q9Y5A7 615 aa3.89□□□□□ -1.79
RNU6-1109P-201ENST00000391187 ACOT7O00154 380 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SUSD5O60279 629 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 GNAT1P11488 350 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 LMO1P25800 156 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 DNAJA1P31689 397 aaKnown RBP3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 RPS19P39019 145 aaKnown RBP3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 GJA8P48165 433 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 DPP8Q6V1X1 898 aaPredicted RBP3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 METTL16Q86W50 562 aaKnown RBP3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SCUBE1Q8IWY4 988 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 ULK2Q8IYT8 1036 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SEC16BQ96JE7 1060 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SCYL1Q96KG9 808 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 GPR27Q9NS67 375 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PLA2G3Q9NZ20 509 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 CEP72Q9P209 647 aa3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PUF60Q9UHX1 559 aaKnown RBP3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.88□□□□□ -1.79
RNU6-1109P-201ENST00000391187 B2RBV5 119 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SCAMP3O14828 347 aaKnown RBP3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 ARHGAP6O43182 974 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 CAPNS1P04632 268 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PDE6AP16499 860 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 KRT4P19013 534 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SPIRE1Q08AE8 756 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 NFYCQ13952 458 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 LARP1BQ659C4 914 aaKnown RBP3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 MICAL1Q8TDZ2 1067 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 KCTD13Q8WZ19 329 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 CFHR4Q92496 578 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 VOPP1Q96AW1 172 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 TTPALQ9BTX7 342 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 AURKAIP1Q9NWT8 199 aaPredicted RBP3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 DSEQ9UL01 958 aa3.87□□□□□ -1.79
RNU6-1109P-201ENST00000391187 DDAH1O94760 285 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 BMP5P22003 454 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 KCNQ1P51787 676 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 EPHA5P54756 1037 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 HHEXQ03014 270 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 DBPQ10586 325 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 MAP4K2Q12851 820 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 GRM7Q14831 915 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 WDR72Q3MJ13 1102 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 Q6ZPA2 131 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 USP53Q70EK8 1073 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 KCTD1Q719H9 257 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 LARP4Q71RC2 724 aaKnown RBP eCLIP3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 NAF1Q96HR8 494 aaKnown RBP3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PRRX2Q99811 253 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PHF20Q9BVI0 1012 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 ZDHHC5Q9C0B5 715 aa3.86□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SMAD7O15105 426 aaKnown RBP3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 FOXN1O15353 648 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 GRK2P25098 689 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 GRK3P35626 688 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 IL12RB1P42701 662 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 ETV4P43268 484 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PPP2R2AP63151 447 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 FSTL1Q12841 308 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 HABP4Q5JVS0 413 aaKnown RBP3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 RSPO2Q6UXX9 243 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 LBX2Q6XYB7 198 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 USP30Q70CQ3 517 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 TMPRSS6Q8IU80 811 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 GPR135Q8IZ08 494 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 THEMISQ8N1K5 641 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 TMEM176AQ96HP8 235 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 IER2Q9BTL4 223 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 KIAA1683Q9H0B3 1180 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 PARPBPQ9NWS1 579 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 STRIP2Q9ULQ0 834 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 GIT1Q9Y2X7 761 aa3.85□□□□□ -1.79
RNU6-1109P-201ENST00000391187 DLX3O60479 287 aa3.84□□□□□ -1.79
RNU6-1109P-201ENST00000391187 HMGCRP04035 888 aa3.84□□□□□ -1.79
RNU6-1109P-201ENST00000391187 ADCY8P40145 1251 aa3.84□□□□□ -1.79
RNU6-1109P-201ENST00000391187 COL10A1Q03692 680 aa3.84□□□□□ -1.79
RNU6-1109P-201ENST00000391187 BTBD8Q5XKL5 378 aa3.84□□□□□ -1.79
RNU6-1109P-201ENST00000391187 SPTY2D1Q68D10 685 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1109P-201ENST00000391187 LAIR1Q6GTX8 287 aa3.84□□□□□ -1.79
RNU6-1109P-201ENST00000391187 MRM1Q6IN84 353 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms