RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 TMEM191CA6NGB0 347 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 PATL2C9JE40 543 aaKnown RBP2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 MASP2O00187 686 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 ARHGAP6O43182 974 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 MAFKO60675 156 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 SNRPB2P08579 225 aaKnown RBP2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 ENO2P09104 434 aaPredicted RBP2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 HOXC12P31275 282 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 NFYCQ13952 458 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 RRP1BQ14684 758 aaKnown RBP2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 ZMAT1Q5H9K5 638 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 COLEC12Q5KU26 742 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 LARP4Q71RC2 724 aaKnown RBP eCLIP2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 GPR135Q8IZ08 494 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 PTGFRNQ9P2B2 879 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 PPARGC1AQ9UBK2 798 aaKnown RBP2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 GIT1Q9Y2X7 761 aa2.82□□□□□ -1.96
RNU6-239P-201ENST00000390990 ACOT7O00154 380 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 KRIT1O00522 736 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 CUTAO60888 179 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 RPS6KA4O75676 772 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 PEX11BO96011 259 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 LMNAP02545 664 aaKnown RBP2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 GCP02774 474 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 ERBB2P04626 1255 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 ITGAVP06756 1048 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 SOX9P48436 509 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 C21orf58P58505 322 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 RACK1P63244 317 aaKnown RBP2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 GRM7Q14831 915 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 PCOLCEQ15113 449 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 MBNL2Q5VZF2 373 aaKnown RBP2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 PRIMA1Q86XR5 153 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 TMEM87AQ8NBN3 555 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 PDGFDQ9GZP0 370 aaPredicted RBP2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 KIAA1683Q9H0B3 1180 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 SLC39A2Q9NP94 309 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 PUF60Q9UHX1 559 aaKnown RBP2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 EFR3BQ9Y2G0 817 aa2.81□□□□□ -1.96
RNU6-239P-201ENST00000390990 CAPN14A8MX76 684 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 COL6A2P12110 1019 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 ZNF37AP17032 561 aaPredicted RBP2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 ETV4P43268 484 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 ZNF143P52747 638 aaPredicted RBP2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 CASP7P55210 303 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 HHEXQ03014 270 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 COL9A2Q14055 689 aaPredicted RBP2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 GAREM2Q75VX8 874 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 ADGRE4PQ86SQ3 457 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 ZNF227Q86WZ6 799 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 VRK3Q8IV63 474 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 THEMISQ8N1K5 641 aaPredicted RBP2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 D2HGDHQ8N465 521 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 TMEM145Q8NBT3 493 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 OR6P1Q8NGX9 317 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 C1orf159Q96HA4 380 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 TMEM176AQ96HP8 235 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 SHDQ96IW2 340 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 SCYL1Q96KG9 808 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 BBC3Q96PG8 261 aaPredicted RBP2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 TRAIPQ9BWF2 469 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 AGO3Q9H9G7 860 aaKnown RBP2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 ADARB2Q9NS39 739 aaKnown RBP2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 NPFFR2Q9Y5X5 522 aa2.8□□□□□ -1.96
RNU6-239P-201ENST00000390990 INO80B-WBP1J3KQ70 363 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 NKRFO15226 690 aaKnown RBP eCLIP2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 MSCO60682 206 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 CPP00450 1065 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 NAT2P11245 290 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 ITGB6P18564 788 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 ZNF76P36508 570 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 KCNJ6P48051 423 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 GFRA1P56159 465 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 PAPD7Q5XG87 772 aaKnown RBP2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 USP30Q70CQ3 517 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 OTOP3Q7RTS5 596 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 MRGPREQ86SM8 312 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 FAM169BQ8N8A8 192 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 UHMK1Q8TAS1 419 aaKnown RBP2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 MICAL1Q8TDZ2 1067 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 INO80BQ9C086 356 aaPredicted RBP2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 ZDHHC5Q9C0B5 715 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 NELFAQ9H3P2 528 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 RIOX1Q9H6W3 641 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 NRDE2Q9H7Z3 1164 aa2.79□□□□□ -1.96
RNU6-239P-201ENST00000390990 SCNN1GP51170 649 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 KCNQ1P51787 676 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 FANCCQ00597 558 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 HGFACQ04756 655 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 PAK2Q13177 524 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 CRHR2Q13324 411 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 SLC35F1Q5T1Q4 408 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 Q6ZRM9 215 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 CCDC140Q96MF4 163 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 MSL2Q9HCI7 577 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 ZNHIT2Q9UHR6 403 aa2.78□□□□□ -1.96
RNU6-239P-201ENST00000390990 DDX41Q9UJV9 622 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms