RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 MAGEF1Q9HAY2 307 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 ZBTB21Q9ULJ3 1066 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 BMP3P12645 472 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 MAP9Q49MG5 647 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 DNAAF5Q86Y56 855 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 SEPT11Q9NVA2 429 aaKnown RBP13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 CAPN6Q9Y6Q1 641 aa13.32□□□□□ -0.28
CAPRIN1-202ENST00000389645 SMCHD1A6NHR9 2005 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 COASYQ13057 564 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 TUBB2AQ13885 445 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 FAM83BQ5T0W9 1011 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 DCAF4Q8WV16 495 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 IFT81Q8WYA0 676 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 ZBED3Q96IU2 234 aaPredicted RBP13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 TUBB2BQ9BVA1 445 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 CENPHQ9H3R5 247 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 STK17AQ9UEE5 414 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 KIF13BQ9NQT8 1826 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 PLA2G4BP0C869 781 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 VAV2P52735 878 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 ADAM9Q13443 819 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 ECM1Q16610 540 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 SND1Q7KZF4 910 aaKnown RBP eCLIP13.31□□□□□ -0.281e-6■■□□□ 12.8
CAPRIN1-202ENST00000389645 GEMIN8Q9NWZ8 242 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 PACSIN2Q9UNF0 486 aaPredicted RBP13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
CAPRIN1-202ENST00000389645 CYP2C19P33261 490 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 MAEAQ7L5Y9 396 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 RIC8AQ9NPQ8 531 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 FBXO28Q9NVF7 368 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 ARHGAP20Q9P2F6 1191 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 ATP8B1O43520 1251 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 CLSTN1O94985 981 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 FTCDO95954 541 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 CFBP00751 764 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 FKBP3Q00688 224 aaKnown RBP13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 ZSCAN26Q16670 478 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 MIIPQ5JXC2 388 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 IQCEQ6IPM2 695 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 TXLNBQ8N3L3 684 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 FAM133AQ8N9E0 248 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 MTMR8Q96EF0 704 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 P2RX7Q99572 595 aaKnown RBP13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 LRRC27Q9C0I9 530 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 ADAMTS1Q9UHI8 967 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 PCDHB13Q9Y5F0 798 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 GREB1LQ9C091 1923 aaPredicted RBP13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 PPP1R2P41236 205 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 SLC9C1Q4G0N8 1177 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 MTMR14Q8NCE2 650 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 TBC1D5Q92609 795 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.287e-8■■■■■ 136.4
CAPRIN1-202ENST00000389645 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 HACL1Q9UJ83 578 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 COL4A3BPQ9Y5P4 624 aa13.3□□□□□ -0.28
CAPRIN1-202ENST00000389645 ESYT2A0FGR8 921 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 LRRIQ3A6PVS8 624 aaPredicted RBP13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 TMCO5BA8MYB1 307 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 CLIC2O15247 247 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 CAP2P40123 477 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 SYDE2Q5VT97 1194 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 SFMBT2Q5VUG0 894 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 ICE2Q659A1 982 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 CCDC174Q6PII3 467 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 DLK2Q6UY11 383 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 CCDC170Q8IYT3 715 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 TRIM58Q8NG06 486 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 FGFBP2Q9BYJ0 223 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 ANO3Q9BYT9 981 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 PSME4Q14997 1843 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 EIF3CLB5ME19 914 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 PRPF6O94906 941 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 NR2F2P24468 414 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 KLHL30Q0D2K2 578 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 FAM83AQ86UY5 434 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 GUF1Q8N442 669 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 GMCL1P1Q8NEA9 526 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 FAM204AQ9H8W3 233 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 ARHGEF10LQ9HCE6 1279 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 PRR12Q9ULL5 1215 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 L1RE1Q9UN81 338 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 PDE2AO00408 941 aaPredicted RBP13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 CETN3O15182 167 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 FER1L6Q2WGJ9 1857 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 NBPF12Q5TAG4 269 aaPredicted RBP13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 CENPPQ6IPU0 288 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 MYCBPQ99417 103 aaPredicted RBP13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 TSPYL1Q9H0U9 437 aa13.29□□□□□ -0.28
CAPRIN1-202ENST00000389645 DDX39AO00148 427 aaKnown RBP13.28□□□□□ -0.28
CAPRIN1-202ENST00000389645 TBCAO75347 108 aaKnown RBP13.28□□□□□ -0.28
CAPRIN1-202ENST00000389645 GCNT3O95395 438 aa13.28□□□□□ -0.28
CAPRIN1-202ENST00000389645 RDH13Q8NBN7 331 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms