RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 C19orf44Q9H6X5 657 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 ZC3H12BQ5HYM0 836 aaKnown RBP16.71■□□□□ 0.27
ALK-201ENST00000389048 TBC1D22AQ8WUA7 517 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 ZMYM4Q5VZL5 1548 aa16.71■□□□□ 0.26
ALK-201ENST00000389048 FMNL1O95466 1100 aaPredicted RBP16.71■□□□□ 0.26
ALK-201ENST00000389048 BBS5Q8N3I7 341 aa16.71■□□□□ 0.26
ALK-201ENST00000389048 ENOX1Q8TC92 643 aaKnown RBP16.71■□□□□ 0.26
ALK-201ENST00000389048 ZNF668Q96K58 619 aaPredicted RBP16.71■□□□□ 0.26
ALK-201ENST00000389048 SPAG7O75391 227 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 TMPRSS15P98073 1019 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 CASP8Q14790 479 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 SLC9A5Q14940 896 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 SIX6OS1Q8N1H7 587 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 NLRP4Q96MN2 994 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 LRRC4Q9HBW1 653 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 AFF4Q9UHB7 1163 aaKnown RBP16.7■□□□□ 0.26
ALK-201ENST00000389048 DCTN4Q9UJW0 460 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 ANP32DO95626 131 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 KIAA1841Q6NSI8 718 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 FMO2Q99518 471 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 YY1AP1Q9H869 796 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 GGT7Q9UJ14 662 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 DACH2Q96NX9 599 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 LSG1Q9H089 658 aaKnown RBP16.7■□□□□ 0.26
ALK-201ENST00000389048 COG4Q9H9E3 785 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 TEKT2Q9UIF3 430 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 GOLGA8QA0A0J9YX86 632 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 GOLGA8OA6NCC3 632 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 GOLGA8NF8WBI6 632 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 SLFN14P0C7P3 912 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.7■□□□□ 0.26
ALK-201ENST00000389048 PCDHB6Q9Y5E3 794 aa16.7■□□□□ 0.26
ALK-201ENST00000389048 ZBED1O96006 694 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 SOX11P35716 441 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 RNF135Q8IUD6 432 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 CENPKQ9BS16 269 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 MIS12Q9H081 205 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 FBXL5Q9UKA1 691 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
ALK-201ENST00000389048 AOC3Q16853 763 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 TDRD7Q8NHU6 1098 aaKnown RBP16.69■□□□□ 0.26
ALK-201ENST00000389048 EPC1Q9H2F5 836 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 FGGP02679 453 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 ATP2B4P23634 1241 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 PSMA2P25787 234 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 APBA1Q02410 837 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 LRRC14Q15048 493 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 ST13P4Q8IZP2 240 aaPredicted RBP16.69■□□□□ 0.26
ALK-201ENST00000389048 PIK3R5Q8WYR1 880 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 ADAM33Q9BZ11 813 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 USP44Q9H0E7 712 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 CYP4F11Q9HBI6 524 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 MMEP08473 750 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 PLCG1P19174 1290 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 CDC25BP30305 580 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 VCPP55072 806 aaKnown RBP16.69■□□□□ 0.26
ALK-201ENST00000389048 ATXN7L3BQ96GX2 97 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 ZFYVE19Q96K21 471 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 SKIP12755 728 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 FAM182BQ5T319 152 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 TRIM42Q8IWZ5 723 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 LZTS1Q9Y250 596 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 HEY1Q9Y5J3 304 aa16.69■□□□□ 0.26
ALK-201ENST00000389048 KIF17Q9P2E2 1029 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 PALMO75781 387 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 SYT2Q8N9I0 419 aaPredicted RBP16.68■□□□□ 0.26
ALK-201ENST00000389048 PITPNM3Q9BZ71 974 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 SNX24Q9Y343 169 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 USP17L3A6NCW0 530 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 USP17L4A6NCW7 530 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 GYG2O15488 501 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 NCK2O43639 380 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 SH3BGRP55822 239 aaPredicted RBP16.68■□□□□ 0.26
ALK-201ENST00000389048 MAN2A1Q16706 1144 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 USP17L1Q7RTZ2 530 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 KRT26Q7Z3Y9 468 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 SLC7A3Q8WY07 619 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 MAPK13O15264 365 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 LARGE1O95461 756 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 ATP1A3P13637 1013 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 RFWD2Q8NHY2 731 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 ARL8AQ96BM9 186 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 NRBF2Q96F24 287 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 VPS11Q9H270 941 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 SEC31BQ9NQW1 1179 aa16.68■□□□□ 0.26
ALK-201ENST00000389048 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 C1orf146Q5VVC0 180 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 FBXO38Q6PIJ6 1188 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 NEK9Q8TD19 979 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 PIGOQ8TEQ8 1089 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 MMTAG2Q9BU76 263 aaKnown RBP16.67■□□□□ 0.26
ALK-201ENST00000389048 MAPKBP1O60336 1514 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 WDR64B1ANS9 1081 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 STK25O00506 426 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 BPIFB4P59827 614 aa16.67■□□□□ 0.26
ALK-201ENST00000389048 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms