RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 TMEM191CA6NGB0 347 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ZNF839A8K0R7 811 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 KRTAP29-1A8MX34 341 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 CAPN14A8MX76 684 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ACOT7O00154 380 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 MASP2O00187 686 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 MATN2O00339 956 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 NKRFO15226 690 aaKnown RBP eCLIP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 FOXN1O15353 648 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 MSCO60682 206 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 CUTAO60888 179 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 DDAH1O94760 285 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 NUDT3O95989 172 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 HMGCRP04035 888 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 SCG5P05408 212 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 GNAT1P11488 350 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 KRT4P19013 534 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 RPS19P39019 145 aaKnown RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ADCY8P40145 1251 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 GRIA2P42262 883 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 SOX9P48436 509 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 NASPP49321 788 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 KCNQ1P51787 676 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ZNF143P52747 638 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 GFRA1P56159 465 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 KRTAP10-6P60371 365 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 MRPS21P82921 87 aaKnown RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 SPIRE1Q08AE8 756 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 CRHR2Q13324 411 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 TOP3AQ13472 1001 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 RRP1BQ14684 758 aaKnown RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 GRM7Q14831 915 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 NCAPHQ15003 741 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 TBR1Q16650 682 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 CCDC142Q17RM4 750 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 WDR72Q3MJ13 1102 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ACBD5Q5T8D3 534 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 DPP8Q6V1X1 898 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 LARP4Q71RC2 724 aaKnown RBP eCLIP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ERICH6Q7L0X2 663 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 OTOP3Q7RTS5 596 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 PNPLA5Q7Z6Z6 429 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 TMPRSS6Q8IU80 811 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 REXO1L1PQ8IX06 675 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 GSPT2Q8IYD1 628 aaKnown RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ULK2Q8IYT8 1036 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ZNF654Q8IZM8 581 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 D2HGDHQ8N465 521 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 FAM169BQ8N8A8 192 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 TMEM145Q8NBT3 493 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ANAPC16Q96DE5 110 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 SHDQ96IW2 340 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 SCYL1Q96KG9 808 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 SPATA32Q96LK8 384 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 CCDC140Q96MF4 163 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 PRRX2Q99811 253 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 KIAA1683Q9H0B3 1180 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 GZF1Q9H116 711 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 CDIP1Q9H305 208 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 RIOX1Q9H6W3 641 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ZNF703Q9H7S9 590 aaPredicted RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 CEP72Q9P209 647 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 PTGFRNQ9P2B2 879 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ARHGAP28Q9P2N2 729 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 PPARGC1AQ9UBK2 798 aaKnown RBP1.02□□□□□ -2.25
SNORD28-201ENST00000384706 ZNHIT2Q9UHR6 403 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 CDC42EP3Q9UKI2 254 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 DSEQ9UL01 958 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 FAM184BQ9ULE4 1060 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 GIT1Q9Y2X7 761 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 TELO2Q9Y4R8 837 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 NUB1Q9Y5A7 615 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 SLC30A1Q9Y6M5 507 aa1.02□□□□□ -2.25
SNORD28-201ENST00000384706 OBSCNQ5VST9 7968 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP1.01□□□□□ -2.25
SNORD28-201ENST00000384706 ARHGAP6O43182 974 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 GCP02774 474 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 PDIA4P13667 645 aaKnown RBP1.01□□□□□ -2.25
SNORD28-201ENST00000384706 ETV4P43268 484 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 MRE11P49959 708 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 MEOX1P50221 254 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 ZC3H6P61129 1189 aaKnown RBP1.01□□□□□ -2.25
SNORD28-201ENST00000384706 SLC25A3Q00325 362 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 COL10A1Q03692 680 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 DBPQ10586 325 aaPredicted RBP1.01□□□□□ -2.25
SNORD28-201ENST00000384706 DUSP8Q13202 625 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 CNGB1Q14028 1251 aaPredicted RBP1.01□□□□□ -2.25
SNORD28-201ENST00000384706 SLC35F1Q5T1Q4 408 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 MBNL2Q5VZF2 373 aaKnown RBP1.01□□□□□ -2.25
SNORD28-201ENST00000384706 BTBD8Q5XKL5 378 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 LARP1BQ659C4 914 aaKnown RBP1.01□□□□□ -2.25
SNORD28-201ENST00000384706 SPTY2D1Q68D10 685 aaPredicted RBP1.01□□□□□ -2.25
SNORD28-201ENST00000384706 CYP4F22Q6NT55 531 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 PCSK4Q6UW60 755 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 C6orf15Q6UXA7 325 aaPredicted RBP1.01□□□□□ -2.25
SNORD28-201ENST00000384706 Q6ZPA2 131 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 EP400NLQ6ZTU2 488 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 USP30Q70CQ3 517 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 USP53Q70EK8 1073 aa1.01□□□□□ -2.25
SNORD28-201ENST00000384706 KCTD1Q719H9 257 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms