RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 FAM83BQ5T0W9 1011 aa15.27■□□□□ 0.04
NEK4-202ENST00000383721 CCDC70Q6NSX1 233 aa15.27■□□□□ 0.04
NEK4-202ENST00000383721 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.27■□□□□ 0.04
NEK4-202ENST00000383721 NELFCDQ8IXH7 590 aa15.27■□□□□ 0.04
NEK4-202ENST00000383721 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.04
NEK4-202ENST00000383721 BMP2KQ9NSY1 1161 aaPredicted RBP15.27■□□□□ 0.04
NEK4-202ENST00000383721 BUB1O43683 1085 aa15.27■□□□□ 0.03
NEK4-202ENST00000383721 MATR3P43243 847 aaKnown RBP eCLIP15.27■□□□□ 0.03
NEK4-202ENST00000383721 APBA1Q02410 837 aa15.27■□□□□ 0.03
NEK4-202ENST00000383721 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.03
NEK4-202ENST00000383721 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.03
NEK4-202ENST00000383721 KLHDC7AQ5VTJ3 777 aa15.27■□□□□ 0.03
NEK4-202ENST00000383721 FOXR1Q6PIV2 292 aa15.27■□□□□ 0.03
NEK4-202ENST00000383721 TRIM59Q8IWR1 403 aa15.27■□□□□ 0.03
NEK4-202ENST00000383721 AFAP1L1Q8TED9 768 aa15.27■□□□□ 0.03
NEK4-202ENST00000383721 CEP63Q96MT8 703 aa15.27■□□□□ 0.03
NEK4-202ENST00000383721 NT5C3AQ9H0P0 336 aa15.27■□□□□ 0.03
NEK4-202ENST00000383721 KANSL2Q9H9L4 492 aa15.27■□□□□ 0.03
NEK4-202ENST00000383721 FOCADQ5VW36 1801 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 KDM3AQ9Y4C1 1321 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 POTEB3A0JP26 581 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L15C9J2P7 530 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L13C9JLJ4 530 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L11C9JVI0 530 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L18D6R9N7 530 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L22D6RA61 530 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L17D6RBQ6 530 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L19D6RCP7 530 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L20D6RJB6 530 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 PLA2G4BP0C869 781 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L24Q0WX57 530 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 SLC9C1Q4G0N8 1177 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 USP17L6PQ6QN14 398 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 POTEBQ6S5H4 581 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 SCFD1Q8WVM8 642 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 SYN2Q92777 582 aaPredicted RBP15.26■□□□□ 0.03
NEK4-202ENST00000383721 NOX5Q96PH1 765 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 LSM14BQ9BX40 385 aaKnown RBP15.26■□□□□ 0.03
NEK4-202ENST00000383721 RRAGCQ9HB90 399 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 LCMT1Q9UIC8 334 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 HACL1Q9UJ83 578 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 A0A0U1RQG5 324 aaPredicted RBP15.26■□□□□ 0.03
NEK4-202ENST00000383721 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
NEK4-202ENST00000383721 POLR2FP61218 127 aaKnown RBP15.26■□□□□ 0.03
NEK4-202ENST00000383721 SLC7A5Q01650 507 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 SFMBT2Q5VUG0 894 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 CCDC65Q8IXS2 484 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 RNF10Q8N5U6 811 aaKnown RBP15.26■□□□□ 0.03
NEK4-202ENST00000383721 MTMR14Q8NCE2 650 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 KCTD10Q9H3F6 313 aa15.26■□□□□ 0.03
NEK4-202ENST00000383721 SERPING1P05155 500 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 CYP11B2P19099 503 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 EPHX2P34913 555 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 MARSP56192 900 aaKnown RBP15.25■□□□□ 0.03
NEK4-202ENST00000383721 HERC4Q5GLZ8 1057 aaPredicted RBP15.25■□□□□ 0.03
NEK4-202ENST00000383721 HAUS3Q68CZ6 603 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 LRRC31Q6UY01 552 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 SND1Q7KZF4 910 aaKnown RBP eCLIP15.25■□□□□ 0.03
NEK4-202ENST00000383721 GPBP1Q86WP2 473 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 ZFPM1Q8IX07 1006 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 RUBCNQ92622 972 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 NUCKS1Q9H1E3 243 aaKnown RBP15.25■□□□□ 0.03
NEK4-202ENST00000383721 KCNMB3Q9NPA1 279 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 ADARB2Q9NS39 739 aaKnown RBP15.25■□□□□ 0.03
NEK4-202ENST00000383721 ZNF70Q9UC06 446 aaPredicted RBP15.25■□□□□ 0.03
NEK4-202ENST00000383721 IVLP07476 585 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 POTEIP0CG38 1075 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 POTEJP0CG39 1038 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 CCDC181Q5TID7 509 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 TAF1DQ9H5J8 278 aaPredicted RBP15.25■□□□□ 0.03
NEK4-202ENST00000383721 VEZTQ9HBM0 779 aa15.25■□□□□ 0.03
NEK4-202ENST00000383721 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.25■□□□□ 0.03
NEK4-202ENST00000383721 GOLGA6BA6NDN3 693 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 TCP10L2B9ZVM9 353 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 GNA14O95837 355 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 STAT3P40763 770 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 TCP10Q12799 353 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 QRICH1Q2TAL8 776 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 ARSHQ5FYA8 562 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 GOLGA6L1Q8N7Z2 621 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 MS4A14Q96JA4 679 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 EMILIN3Q9NT22 766 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 RBM12Q9NTZ6 932 aaKnown RBP15.24■□□□□ 0.03
NEK4-202ENST00000383721 WDR90Q96KV7 1748 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 MED24O75448 989 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 PAFAH1B1P43034 410 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 EAPPQ56P03 285 aaPredicted RBP15.24■□□□□ 0.03
NEK4-202ENST00000383721 ZC3H3Q8IXZ2 948 aaKnown RBP15.24■□□□□ 0.03
NEK4-202ENST00000383721 NAP1L4Q99733 375 aaKnown RBP15.24■□□□□ 0.03
NEK4-202ENST00000383721 STIM2Q9P246 746 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 FAM198AQ9UFP1 575 aa15.24■□□□□ 0.03
NEK4-202ENST00000383721 FRMD3A2A2Y4 597 aa15.23■□□□□ 0.03
NEK4-202ENST00000383721 USP11P51784 963 aa15.23■□□□□ 0.03
NEK4-202ENST00000383721 NAP1L1P55209 391 aaKnown RBP15.23■□□□□ 0.03
NEK4-202ENST00000383721 DLK2Q6UY11 383 aa15.23■□□□□ 0.03
NEK4-202ENST00000383721 TBC1D5Q92609 795 aa15.23■□□□□ 0.03
NEK4-202ENST00000383721 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
NEK4-202ENST00000383721 PCDHA1Q9Y5I3 950 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms