RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 PCDHB6Q9Y5E3 794 aa18.25■□□□□ 0.51
SNRPB-201ENST00000381342 H3BRB1 525 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 TBX3O15119 743 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 MARCH6O60337 910 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 B4GALT4O60513 344 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 MARK3P27448 753 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 RESTQ13127 1097 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 C9orf50Q5SZB4 431 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 NFRKBQ6P4R8 1299 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 ABHD15Q6UXT9 468 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 CCDC60Q8IWA6 550 aaPredicted RBP18.24■□□□□ 0.51
SNRPB-201ENST00000381342 DEFB123Q8N688 67 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 GLG1Q92896 1179 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 FAM20AQ96MK3 541 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 MTIF3Q9H2K0 278 aaKnown RBP18.24■□□□□ 0.51
SNRPB-201ENST00000381342 TUT1Q9H6E5 874 aaKnown RBP18.24■□□□□ 0.51
SNRPB-201ENST00000381342 VAV3Q9UKW4 847 aa18.24■□□□□ 0.51
SNRPB-201ENST00000381342 ZNF215Q9UL58 517 aaPredicted RBP18.24■□□□□ 0.51
SNRPB-201ENST00000381342 TRIP12Q14669 1992 aaPredicted RBP18.24■□□□□ 0.51
SNRPB-201ENST00000381342 WDR64B1ANS9 1081 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 BACH1O14867 736 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 LGR5O75473 907 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 ATG7O95352 703 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 CYP2C18P33260 490 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 MIS18BP1Q6P0N0 1132 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 PSRC1Q6PGN9 363 aaPredicted RBP18.23■□□□□ 0.51
SNRPB-201ENST00000381342 BRAPQ7Z569 592 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 SMAP1Q8IYB5 467 aaPredicted RBP18.23■□□□□ 0.51
SNRPB-201ENST00000381342 SLFN12Q8IYM2 578 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 RPUSD2Q8IZ73 545 aaKnown RBP18.23■□□□□ 0.51
SNRPB-201ENST00000381342 RETREG2Q8NC44 543 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 AZI2Q9H6S1 392 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
SNRPB-201ENST00000381342 KAT6AQ92794 2004 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 IGKV6D-21A0A0A0MT36 114 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 BAG4O95429 457 aaKnown RBP18.22■□□□□ 0.51
SNRPB-201ENST00000381342 CSF2RAP15509 400 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 ORC2Q13416 577 aaPredicted RBP18.22■□□□□ 0.51
SNRPB-201ENST00000381342 RILPL1Q5EBL4 403 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 B3GNT9Q6UX72 402 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 MIER3Q7Z3K6 550 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 MTMR9Q96QG7 549 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 SMARCAD1Q9H4L7 1026 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 DISC1Q9NRI5 854 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 TRMT13Q9NUP7 481 aaKnown RBP18.22■□□□□ 0.51
SNRPB-201ENST00000381342 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 TANC1Q9C0D5 1861 aa18.22■□□□□ 0.51
SNRPB-201ENST00000381342 EML1O00423 815 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 PSAPP07602 524 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 OR52Z1P0C646 297 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 SMIM10L2AP0DMW4 78 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 SMIM10L2BP0DMW5 78 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 TXKP42681 527 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 JAK3P52333 1124 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 CCL23P55773 120 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 SMAD3P84022 425 aaKnown RBP18.21■□□□□ 0.51
SNRPB-201ENST00000381342 SPIRE1Q08AE8 756 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 PPP2R5CQ13362 524 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 PKP1Q13835 747 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 UGCGQ16739 394 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 ZNF697Q5TEC3 545 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 FOXD4L5Q5VV16 416 aaPredicted RBP18.21■□□□□ 0.51
SNRPB-201ENST00000381342 FAM160B1Q5W0V3 765 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 NCAPH2Q6IBW4 605 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 GDF6Q6KF10 455 aaPredicted RBP18.21■□□□□ 0.51
SNRPB-201ENST00000381342 SWSAP1Q6NVH7 229 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 CCDC155Q8N6L0 562 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 C7orf31Q8N865 590 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 FOXD4L4Q8WXT5 416 aaPredicted RBP18.21■□□□□ 0.51
SNRPB-201ENST00000381342 RNPEPQ9H4A4 650 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 IL23AQ9NPF7 189 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 ZNF302Q9NR11 478 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.21■□□□□ 0.51
SNRPB-201ENST00000381342 ERAP1Q9NZ08 941 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 GTF2IRD1Q9UHL9 959 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 PCDHA10Q9Y5I2 948 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 ARID2Q68CP9 1835 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 IGSF9BQ9UPX0 1349 aa18.21■□□□□ 0.51
SNRPB-201ENST00000381342 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.2■□□□□ 0.5
SNRPB-201ENST00000381342 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.2■□□□□ 0.5
SNRPB-201ENST00000381342 FGBP02675 491 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 SFNP31947 248 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 STAT5BP51692 787 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 EPHB4P54760 987 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 BFSP2Q13515 415 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 HIC1Q14526 733 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 FAM109BQ6ICB4 259 aaPredicted RBP18.2■□□□□ 0.5
SNRPB-201ENST00000381342 PDXDC2PQ6P474 469 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 FAM173BQ6P4H8 233 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 SESTD1Q86VW0 696 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 AFAP1L1Q8TED9 768 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.2■□□□□ 0.54e-8■■□□□ 13.1
SNRPB-201ENST00000381342 NOC4LQ9BVI4 516 aaKnown RBP18.2■□□□□ 0.5
SNRPB-201ENST00000381342 TTC12Q9H892 705 aaPredicted RBP18.2■□□□□ 0.5
SNRPB-201ENST00000381342 GABBR1Q9UBS5 961 aa18.2■□□□□ 0.5
SNRPB-201ENST00000381342 ACRP10323 421 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 CYP2C9P11712 490 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 PTGDRQ13258 359 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 PLCB4Q15147 1175 aa18.19■□□□□ 0.5
SNRPB-201ENST00000381342 PTGISQ16647 500 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms