RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 FLOT1O75955 427 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 LRRC63Q05C16 580 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 CTTNQ14247 550 aaKnown RBP15.76■□□□□ 0.11
CLCN4-201ENST00000380829 CEP55Q53EZ4 464 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 ANGEL2Q5VTE6 544 aaKnown RBP15.76■□□□□ 0.11
CLCN4-201ENST00000380829 LRRC55Q6ZSA7 311 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 ZKSCAN4Q969J2 545 aaPredicted RBP15.76■□□□□ 0.11
CLCN4-201ENST00000380829 POLD4Q9HCU8 107 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
CLCN4-201ENST00000380829 CCDC175P0C221 793 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 ARP10275 920 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 ALAS1P13196 640 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 VCAM1P19320 739 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 EP400NLQ6ZTU2 488 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 OTOP1Q7RTM1 612 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 BHMT2Q9H2M3 363 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 EHMT1Q9H9B1 1298 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 ADGRG1Q9Y653 693 aa15.76■□□□□ 0.11
CLCN4-201ENST00000380829 PSMD10O75832 226 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 SPP2Q13103 211 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 SYT2Q8N9I0 419 aaPredicted RBP15.75■□□□□ 0.11
CLCN4-201ENST00000380829 TRPM4Q8TD43 1214 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 PCMTD1Q96MG8 357 aaPredicted RBP15.75■□□□□ 0.11
CLCN4-201ENST00000380829 TSG101Q99816 390 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 REEP2Q9BRK0 252 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 EMILIN3Q9NT22 766 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 RASSF10A6NK89 507 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 GAS7O60861 476 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 TRIM21P19474 475 aaKnown RBP15.75■□□□□ 0.11
CLCN4-201ENST00000380829 FECHP22830 423 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 GIT2Q14161 759 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 RSRC2Q7L4I2 434 aaKnown RBP15.75■□□□□ 0.11
CLCN4-201ENST00000380829 TPH2Q8IWU9 490 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 ACRBPQ8NEB7 543 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 PIGOQ8TEQ8 1089 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 CLEC4DQ8WXI8 215 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 SLC5A5Q92911 643 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 POLR3CQ9BUI4 534 aaPredicted RBP15.75■□□□□ 0.11
CLCN4-201ENST00000380829 RPAP3Q9H6T3 665 aaPredicted RBP15.75■□□□□ 0.11
CLCN4-201ENST00000380829 LZTFL1Q9NQ48 299 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 AGPAT5Q9NUQ2 364 aa15.75■□□□□ 0.11
CLCN4-201ENST00000380829 LUC7L2Q9Y383 392 aaKnown RBP15.75■□□□□ 0.11
CLCN4-201ENST00000380829 FRMD3A2A2Y4 597 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 IVLP07476 585 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 HSD17B4P51659 736 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 ZCWPW2Q504Y3 356 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 TMTC1Q8IUR5 882 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 IL31RAQ8NI17 732 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 SCFD1Q8WVM8 642 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 DYDC2Q96IM9 177 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 WRNIP1Q96S55 665 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 CHP1Q99653 195 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 ZNF577Q9BSK1 485 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 RUSC1Q9BVN2 902 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 SUGCTQ9HAC7 445 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 SLC38A10Q9HBR0 1119 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
CLCN4-201ENST00000380829 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 PITPNM2Q9BZ72 1349 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 GOLGA6L9A6NEM1 432 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 RSPH10B2B2RC85 870 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 TRAF5O00463 557 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 ZBTB39O15060 712 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 TUBB4AP04350 444 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 RSPH10BP0C881 870 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 CASP5P51878 434 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 GNG11P61952 73 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 VWA3BQ502W6 1294 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 CYP26C1Q6V0L0 522 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 HSD17B14Q9BPX1 270 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 IRX2Q9BZI1 471 aaPredicted RBP15.74■□□□□ 0.11
CLCN4-201ENST00000380829 BCAS3Q9H6U6 928 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 CAPN11Q9UMQ6 739 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 FAN1Q9Y2M0 1017 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 MRFAP1Q9Y605 127 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 STK24Q9Y6E0 443 aa15.74■□□□□ 0.11
CLCN4-201ENST00000380829 SLITRK3O94933 977 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 FGFR1OPO95684 399 aaKnown RBP15.73■□□□□ 0.11
CLCN4-201ENST00000380829 PPP2R5CQ13362 524 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 FKBP15Q5T1M5 1219 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 DCAF15Q66K64 600 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 SFR1Q86XK3 245 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 OR8K1Q8NGG5 319 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 TTYH3Q9C0H2 523 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 NDST4Q9H3R1 872 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 PPP1R9AQ9ULJ8 1098 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 DDX39AO00148 427 aaKnown RBP15.73■□□□□ 0.11
CLCN4-201ENST00000380829 ITGB5P18084 799 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 MAP3K9P80192 1104 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 WNK4Q96J92 1243 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 DNAJC7Q99615 494 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 UNC45AQ9H3U1 944 aa15.73■□□□□ 0.11
CLCN4-201ENST00000380829 IPO5O00410 1097 aaKnown RBP15.72■□□□□ 0.11
CLCN4-201ENST00000380829 PHACTR2O75167 634 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 EYA4O95677 639 aa15.72■□□□□ 0.11
CLCN4-201ENST00000380829 HOXA7P31268 230 aaPredicted RBP15.72■□□□□ 0.11
CLCN4-201ENST00000380829 FKBP3Q00688 224 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms