RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 FOXO4P98177 505 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 SLC18A3Q16572 532 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 STK32AQ8WU08 396 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 DDX12PQ92771 950 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 OPTNQ96CV9 577 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 CCDC28BQ9BUN5 200 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 USP40Q9NVE5 1235 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 DLGAP2Q9P1A6 1054 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 AMFRQ9UKV5 643 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 ATP6V0A2Q9Y487 856 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 ZPR1O75312 459 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 DCTN3O75935 186 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 KLK7P49862 253 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 CCDC15Q0P6D6 951 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 RAPGEF1Q13905 1077 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 SPRED3Q2MJR0 410 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 CCDC174Q6PII3 467 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 ARHGEF18Q6ZSZ5 1173 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 RBBP8NLQ8NC74 664 aaPredicted RBP7.88□□□□□ -1.15
DDX58-202ENST00000379883 ANKS1AQ92625 1134 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 STMN2Q93045 179 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 CCDC77Q9BR77 488 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 KCNK9Q9NPC2 374 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 ADAM22Q9P0K1 906 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 NOC2LQ9Y3T9 749 aaKnown RBP7.88□□□□□ -1.15
DDX58-202ENST00000379883 SPDYE3A6NKU9 549 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 NVLO15381 856 aaKnown RBP7.88□□□□□ -1.15
DDX58-202ENST00000379883 STX2P32856 288 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 PDE6BP35913 854 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 VHLP40337 213 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 RNASELQ05823 741 aaKnown RBP7.88□□□□□ -1.15
DDX58-202ENST00000379883 DHX34Q14147 1143 aaKnown RBP7.88□□□□□ -1.15
DDX58-202ENST00000379883 UAP1Q16222 522 aaPredicted RBP7.88□□□□□ -1.15
DDX58-202ENST00000379883 NUGGCQ68CJ6 796 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 ANKRD40Q6AI12 368 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 PHLDB3Q6NSJ2 640 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 PPP1R21Q6ZMI0 780 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 BCL9LQ86UU0 1499 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 SCFD2Q8WU76 684 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 OLFM3Q96PB7 478 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 RIC8AQ9NPQ8 531 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 BMP2KQ9NSY1 1161 aaPredicted RBP7.88□□□□□ -1.15
DDX58-202ENST00000379883 ABCF3Q9NUQ8 709 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 CYP39A1Q9NYL5 469 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 AIPL1Q9NZN9 384 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 LRCH1Q9Y2L9 728 aa7.88□□□□□ -1.15
DDX58-202ENST00000379883 PRAMEF22A3QJZ6 481 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 MAPK13O15264 365 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 DDAH1O94760 285 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 PEX5P50542 639 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 DR1Q01658 176 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 KPNB1Q14974 876 aaKnown RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 SV2BQ7L1I2 683 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.87□□□□□ -1.15
DDX58-202ENST00000379883 LRRC8CQ8TDW0 803 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 TBC1D5Q92609 795 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 ZNF512BQ96KM6 892 aaPredicted RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 SPZ1Q9BXG8 430 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 AP1M1Q9BXS5 423 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 CNNM1Q9NRU3 951 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 LMTK3Q96Q04 1460 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 PDE6AP16499 860 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 STRN3Q13033 797 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 KIF2BQ8N4N8 673 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 ZNF513Q8N8E2 541 aaPredicted RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 STRBPQ96SI9 672 aaKnown RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 EPAS1Q99814 870 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 ZKSCAN3Q9BRR0 538 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 CCSER1Q9C0I3 900 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 DCLRE1BQ9H816 532 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 TMEM59LQ9UK28 342 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 SLC4A7Q9Y6M7 1214 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 KDM3BQ7LBC6 1761 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 COQ9O75208 318 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 KRT16P08779 473 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 CDC25CP30307 473 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 C6orf163Q5TEZ5 329 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 CABP7Q86V35 215 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 ARHGAP24Q8N264 748 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 PROM2Q8N271 834 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 SMC1BQ8NDV3 1235 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 PRCCQ92733 491 aaPredicted RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 INPP5DQ92835 1189 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 DUSP9Q99956 384 aaKnown RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 LSM14BQ9BX40 385 aaKnown RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 DDX47Q9H0S4 455 aaKnown RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 SLC52A2Q9HAB3 445 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 IL1RAPL1Q9NZN1 696 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 ATXN10Q9UBB4 475 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 TMCO1Q9UM00 188 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 TCP11X1B4DZS4 312 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 PODXLO00592 558 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 MAP3K7O43318 606 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 PFDN1O60925 122 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 MBD4O95243 580 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 PRPF4BQ13523 1007 aaKnown RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 RNF43Q68DV7 783 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 ZNF594Q96JF6 807 aaPredicted RBP7.87□□□□□ -1.15
DDX58-202ENST00000379883 RAB34Q9BZG1 259 aa7.87□□□□□ -1.15
DDX58-202ENST00000379883 TRIM31Q9BZY9 425 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms