RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 ZDHHC15Q96MV8 337 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 PNMA5Q96PV4 448 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 TSPYL1Q9H0U9 437 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 KCNJ14Q9UNX9 436 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 SEC31AO94979 1220 aaKnown RBP7.17□□□□□ -1.26
NEDD9-202ENST00000379446 VCAM1P19320 739 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 ADD2P35612 726 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 TLE2Q04725 743 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 TSTA3Q13630 321 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-202ENST00000379446 RAB30Q15771 203 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 DDX53Q86TM3 631 aaKnown RBP7.17□□□□□ -1.26
NEDD9-202ENST00000379446 FAM178BQ8IXR5 827 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 AFG1LQ8WV93 481 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 GABBR1Q9UBS5 961 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 MEGF6O75095 1541 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 FAM47DPA6NHR8 397 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 TLR2O60603 784 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 TMEM132BQ14DG7 1078 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 MAPK6Q16659 721 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 CCDC144BQ3MJ40 725 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 USP17L6PQ6QN14 398 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 STOX1Q6ZVD7 989 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 DIS3L2Q8IYB7 885 aaKnown RBP7.17□□□□□ -1.26
NEDD9-202ENST00000379446 CSGALNACT1Q8TDX6 532 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 AGBL1Q96MI9 1066 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 KMT5AQ9NQR1 393 aa7.17□□□□□ -1.26
NEDD9-202ENST00000379446 MED23Q9ULK4 1368 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 ELP1O95163 1332 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 KPNA6O60684 536 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 SLFN14P0C7P3 912 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 PPARDQ03181 441 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 ACVR2BQ13705 512 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 PRR23BQ6ZRT6 265 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 GPR142Q7Z601 462 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 FANCBQ8NB91 859 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 PPP1R13LQ8WUF5 828 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 IWS1Q96ST2 819 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 CENPHQ9H3R5 247 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 NXF1Q9UBU9 619 aaKnown RBP7.16□□□□□ -1.26
NEDD9-202ENST00000379446 DDX41Q9UJV9 622 aaKnown RBP7.16□□□□□ -1.26
NEDD9-202ENST00000379446 CPSF3Q9UKF6 684 aaKnown RBP7.16□□□□□ -1.26
NEDD9-202ENST00000379446 CEMIPQ8WUJ3 1361 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 ZNF536O15090 1300 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 PFKFB2O60825 505 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 CAPN2P17655 700 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 MNAT1P51948 309 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 NR1H3Q13133 447 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 SPECC1Q5M775 1068 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 NELFCDQ8IXH7 590 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 SLFN12Q8IYM2 578 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 TINF2Q9BSI4 451 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 EPC1Q9H2F5 836 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 PLEKHA4Q9H4M7 779 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 DYRK4Q9NR20 520 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 FARP1Q9Y4F1 1045 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-202ENST00000379446 PCDHB9Q9Y5E1 797 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 TLL2Q9Y6L7 1015 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 GNRH1P01148 92 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 PTPRAP18433 802 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 SYKP43405 635 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 KIAA0753Q2KHM9 967 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 SEPT5Q99719 369 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-202ENST00000379446 GOLPH3LQ9H4A5 285 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 GPR108Q9NPR9 543 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 SLC12A6Q9UHW9 1150 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 ABCC12Q96J65 1359 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 RPTORQ8N122 1335 aa7.16□□□□□ -1.26
NEDD9-202ENST00000379446 POTEB3A0JP26 581 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 SLC15A5A6NIM6 579 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 WDR64B1ANS9 1081 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 ITGA4P13612 1032 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 PDIA3P30101 505 aaKnown RBP7.15□□□□□ -1.26
NEDD9-202ENST00000379446 ALDH1A3P47895 512 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 CYP2J2P51589 502 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 PLCB3Q01970 1234 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 ITKQ08881 620 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 ZSCAN26Q16670 478 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 POTEBQ6S5H4 581 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 SND1Q7KZF4 910 aaKnown RBP eCLIP7.15□□□□□ -1.26
NEDD9-202ENST00000379446 ZNF512Q96ME7 567 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-202ENST00000379446 COLEC11Q9BWP8 271 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 PUS7LQ9H0K6 701 aaKnown RBP7.15□□□□□ -1.26
NEDD9-202ENST00000379446 RPF1Q9H9Y2 349 aaKnown RBP7.15□□□□□ -1.26
NEDD9-202ENST00000379446 DISC1Q9NRI5 854 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 TMEM260Q9NX78 707 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 PCDHA7Q9UN72 937 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 CLIC4Q9Y696 253 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 BCL9LQ86UU0 1499 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 ATP8B3O60423 1300 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 CCDC172P0C7W6 258 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 PCP11498 1178 aaKnown RBP7.15□□□□□ -1.26
NEDD9-202ENST00000379446 ATP2A2P16615 1042 aaKnown RBP7.15□□□□□ -1.26
NEDD9-202ENST00000379446 TECP42680 631 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 NDUFA8P51970 172 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 RTP1P59025 263 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 QRICH1Q2TAL8 776 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 NEK8Q86SG6 692 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 DEFB123Q8N688 67 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 RASGRP4Q8TDF6 673 aa7.15□□□□□ -1.26
NEDD9-202ENST00000379446 STAMQ92783 540 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms