RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 CHRNA1P02708 482 aa21.57■■□□□ 1.04
TMEM88B-201ENST00000378821 CYP3A4P08684 503 aa21.57■■□□□ 1.04
TMEM88B-201ENST00000378821 HTRA4P83105 476 aaPredicted RBP21.57■■□□□ 1.04
TMEM88B-201ENST00000378821 PPM1EQ8WY54 764 aa21.57■■□□□ 1.04
TMEM88B-201ENST00000378821 SEPT8Q92599 483 aa21.57■■□□□ 1.04
TMEM88B-201ENST00000378821 PGBD1Q96JS3 809 aa21.57■■□□□ 1.04
TMEM88B-201ENST00000378821 ZBED2Q9BTP6 218 aa21.57■■□□□ 1.04
TMEM88B-201ENST00000378821 CERS4Q9HA82 394 aa21.57■■□□□ 1.04
TMEM88B-201ENST00000378821 TMEM260Q9NX78 707 aa21.57■■□□□ 1.04
TMEM88B-201ENST00000378821 RBAK-RBAKDNI3L0D1 243 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 ERVK-21P61565 698 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 CCT2P78371 535 aaKnown RBP21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 MGAT3Q09327 533 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 PPFIA1Q13136 1202 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 ITGB3BPQ13352 177 aaPredicted RBP21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 CCDC85BQ15834 202 aaPredicted RBP21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 GRIK4Q16099 956 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 MCTP2Q6DN12 878 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 RUFY4Q6ZNE9 571 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 PLPPR4Q7Z2D5 763 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 SPRED2Q7Z698 418 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 SP7Q8TDD2 431 aaPredicted RBP21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 ARNTL2Q8WYA1 636 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 APBB2Q92870 758 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 GLG1Q92896 1179 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 NCOA5Q9HCD5 579 aaKnown RBP21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 PKD2L1Q9P0L9 805 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 THEGQ9P2T0 379 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 INSL6Q9Y581 213 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 COL4A6Q14031 1691 aa21.56■■□□□ 1.04
TMEM88B-201ENST00000378821 PRRC2BQ5JSZ5 2229 aaKnown RBP21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 IGKV6D-21A0A0A0MT36 114 aa21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 AMHP03971 560 aa21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 ACTR2P61160 394 aa21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 TOP1MTQ969P6 601 aa21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 ASB2Q96Q27 587 aa21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 SDF4Q9BRK5 362 aa21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 LMCD1Q9NZU5 365 aa21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 TUBE1Q9UJT0 475 aa21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 COL4A4P53420 1690 aaPredicted RBP21.55■■□□□ 1.04
TMEM88B-201ENST00000378821 IGLV3-22A0A075B6J6 115 aa21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 LINC01553A4QN01 128 aa21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 RRN3P2A6NIE6 340 aa21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 FAM86B1E9PN63 330 aa21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 ADAMTS3O15072 1205 aa21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 GTPBP6O43824 516 aaPredicted RBP21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 RPLP2P05387 115 aaKnown RBP21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 CTSHP09668 335 aa21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 FAM86B2P0C5J1 330 aa21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 GRB10Q13322 594 aa21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 CCDC12Q8WUD4 166 aaPredicted RBP21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 ZNF274Q96GC6 653 aaPredicted RBP21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 RNF26Q9BY78 433 aaPredicted RBP21.54■■□□□ 1.04
TMEM88B-201ENST00000378821 DHX15O43143 795 aaKnown RBP21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 INSRRP14616 1297 aa21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 IFNAR1P17181 557 aa21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 MARK3P27448 753 aa21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 SLC26A2P50443 739 aa21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 AK2P54819 239 aa21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 MRPS5P82675 430 aaKnown RBP21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 STK3Q13188 491 aa21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 PHKBQ93100 1093 aa21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 TGS1Q96RS0 853 aaKnown RBP21.53■■□□□ 1.04
TMEM88B-201ENST00000378821 PPFIA3O75145 1194 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 CCNE2O96020 404 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 STAT5BP51692 787 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 PLCB4Q15147 1175 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 JAKMIP3Q5VZ66 844 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 ABHD15Q6UXT9 468 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 RSPH3Q86UC2 560 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 TNPO1Q92973 898 aaKnown RBP21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 IFIH1Q9BYX4 1025 aaKnown RBP21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 TSPYL2Q9H2G4 693 aaPredicted RBP21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 AZI2Q9H6S1 392 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 SUGCTQ9HAC7 445 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 C6orf50Q9HD87 102 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 TPCN1Q9ULQ1 816 aa21.52■■□□□ 1.04
TMEM88B-201ENST00000378821 GNA11P29992 359 aa21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 CIITAP33076 1130 aa21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 LPIN1Q14693 890 aa21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 KRT40Q6A162 431 aa21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 MYOCDQ8IZQ8 938 aa21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 REXO1Q8N1G1 1221 aaKnown RBP21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 DNAJB3Q8WWF6 145 aa21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 C22orf23Q9BZE7 217 aa21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 PCDHA2Q9Y5H9 948 aa21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 SQORQ9Y6N5 450 aa21.51■■□□□ 1.03
TMEM88B-201ENST00000378821 ZNF76P36508 570 aa21.5■■□□□ 1.03
TMEM88B-201ENST00000378821 NEK4P51957 841 aa21.5■■□□□ 1.03
TMEM88B-201ENST00000378821 PLA2G4DQ86XP0 818 aa21.5■■□□□ 1.03
TMEM88B-201ENST00000378821 KIF2CQ99661 725 aa21.5■■□□□ 1.03
TMEM88B-201ENST00000378821 SLC26A6Q9BXS9 759 aa21.5■■□□□ 1.03
TMEM88B-201ENST00000378821 SH3GLB2Q9NR46 395 aa21.5■■□□□ 1.03
TMEM88B-201ENST00000378821 TTC28Q96AY4 2481 aa21.49■■□□□ 1.03
TMEM88B-201ENST00000378821 XIRP2A4UGR9 3374 aa21.49■■□□□ 1.03
TMEM88B-201ENST00000378821 IPO5O00410 1097 aaKnown RBP21.49■■□□□ 1.03
TMEM88B-201ENST00000378821 SCRN1Q12765 414 aa21.49■■□□□ 1.03
TMEM88B-201ENST00000378821 ANKRD1Q15327 319 aa21.49■■□□□ 1.03
TMEM88B-201ENST00000378821 FBXO47Q5MNV8 452 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms