RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 HOXA7P31268 230 aaPredicted RBP15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 CFAP221Q4G0U5 840 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 KLHL7Q8IXQ5 586 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 PANX2Q96RD6 677 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 ELP3Q9H9T3 547 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 SPTLC3Q9NUV7 552 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 USTQ9Y2C2 406 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 CACNA1FO60840 1977 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 K7ERI5 159 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 ENC1O14682 589 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 FAM133AQ8N9E0 248 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 TOPAZ1Q8N9V7 1692 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 UBL4BQ8N7F7 174 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 NT5C1BQ96P26 610 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 NAP1L3Q99457 506 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 GABBR1Q9UBS5 961 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 CTNND1O60716 968 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 NDUFA10O95299 355 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 EIF4A3P38919 411 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 MXI1P50539 228 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 EARS2Q5JPH6 523 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 SWSAP1Q6NVH7 229 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 DAAM2Q86T65 1068 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 CCDC26Q8TAB7 109 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 USP27XA6NNY8 438 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 SRGAP2CP0DJJ0 459 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 EPHA7Q15375 998 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 PPP1R7Q15435 360 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 CCDC25Q86WR0 208 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 RBM46Q8TBY0 533 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 TRIM31Q9BZY9 425 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 EPC1Q9H2F5 836 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 AKT3Q9Y243 479 aa15.48■□□□□ 0.07
SHROOM1-203ENST00000378679 MYMKA6NI61 221 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 M0QZ92 97 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 MYZAPP0CAP1 466 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 SYCE1Q8N0S2 351 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 DAGLBQ8NCG7 672 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 RIOX1Q9H6W3 641 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 GAKO14976 1311 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 NR3C1P04150 777 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 SLURP2P0DP57 97 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 INPP5BP32019 993 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 ZSCAN26Q16670 478 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 KNOP1Q1ED39 458 aaKnown RBP15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 ANKRD40Q6AI12 368 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 ZNF710Q8N1W2 664 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 PROM2Q8N271 834 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 C2orf69Q8N8R5 385 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 ATG4CQ96DT6 458 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 PLEKHA4Q9H4M7 779 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 ADAMTS1Q9UHI8 967 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 TSKSQ9UJT2 592 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 BZW2Q9Y6E2 419 aaKnown RBP15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 LMO7Q8WWI1 1683 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 C19orf81C9J6K1 198 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 KCNK3O14649 394 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 ILDR1Q86SU0 546 aaPredicted RBP15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 ADSSL1Q8N142 457 aa15.47■□□□□ 0.07
SHROOM1-203ENST00000378679 SLC37A4O43826 429 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 GFPT2O94808 682 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 FERP16591 822 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 TFDP1Q14186 410 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 MCPH1Q8NEM0 835 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 CCDC114Q96M63 670 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 FERMT1Q9BQL6 677 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 IDI2Q9BXS1 227 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 ZCCHC17Q9NP64 241 aaKnown RBP15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 AMFRQ9UKV5 643 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 HPSEQ9Y251 543 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 SLC16A4O15374 487 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 TNNC2P02585 160 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 CALCOCO2Q13137 446 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 NHEJ1Q9H9Q4 299 aaPredicted RBP15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 NPHP3-ACAD11A0A0J9YXS1 232 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 TLDC2A0PJX2 215 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 IQCA1LA6NCM1 817 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 CYTH3O43739 400 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 VEGFAP15692 232 aaPredicted RBP15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 EHHADHQ08426 723 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 SF3A3Q12874 501 aaKnown RBP eCLIP15.46■□□□□ 0.072e-6■■□□□ 12.5
SHROOM1-203ENST00000378679 RNF169Q8NCN4 708 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 NLRP4Q96MN2 994 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 PCDHAC2Q9Y5I4 1007 aa15.46■□□□□ 0.07
SHROOM1-203ENST00000378679 TBX3O15119 743 aa15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 EYA4O95677 639 aa15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 NR3C2P08235 984 aa15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 LMNB1P20700 586 aa15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 SFNP31947 248 aa15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 SLC8A3P57103 927 aa15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 MAP3K9P80192 1104 aa15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 NAALADL2Q58DX5 795 aa15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 NBPF12Q5TAG4 269 aaPredicted RBP15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 TMX2Q9Y320 296 aa15.46■□□□□ 0.06
SHROOM1-203ENST00000378679 PCDHA10Q9Y5I2 948 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms