RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 ARHGAP4P98171 946 aa16.92■□□□□ 0.3
RER1-203ENST00000378513 CTTNQ14247 550 aaKnown RBP16.92■□□□□ 0.3
RER1-203ENST00000378513 DDX42Q86XP3 938 aaKnown RBP eCLIP16.92■□□□□ 0.3
RER1-203ENST00000378513 TRIM59Q8IWR1 403 aa16.92■□□□□ 0.3
RER1-203ENST00000378513 KCTD10Q9H3F6 313 aa16.92■□□□□ 0.3
RER1-203ENST00000378513 PSD3Q9NYI0 1048 aa16.92■□□□□ 0.3
RER1-203ENST00000378513 PKD2L1Q9P0L9 805 aa16.92■□□□□ 0.3
RER1-203ENST00000378513 STIM2Q9P246 746 aa16.92■□□□□ 0.3
RER1-203ENST00000378513 HEXIM1O94992 359 aaKnown RBP16.91■□□□□ 0.3
RER1-203ENST00000378513 PPP1R2P41236 205 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 CRKP46108 304 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 CCT5P48643 541 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 CERKLQ49MI3 558 aaPredicted RBP16.91■□□□□ 0.3
RER1-203ENST00000378513 MAEAQ7L5Y9 396 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 CERKQ8TCT0 537 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 TEKT1Q969V4 418 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
RER1-203ENST00000378513 CEP72Q9P209 647 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 HDAC9Q9UKV0 1011 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 ATP6V0A2Q9Y487 856 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 ADAMTSL1Q8N6G6 1762 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 KCNK3O14649 394 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 SMARCA1P28370 1054 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 HOXD13P35453 343 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 COL24A1Q17RW2 1714 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 ZC2HC1CQ53FD0 456 aaPredicted RBP16.91■□□□□ 0.3
RER1-203ENST00000378513 ZNF662Q6ZS27 426 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 RUSC1Q9BVN2 902 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 TCP1P17987 556 aaKnown RBP16.91■□□□□ 0.3
RER1-203ENST00000378513 ASIC2Q16515 512 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 ICE2Q659A1 982 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 SH3BP5LQ7L8J4 393 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 ZNF571Q7Z3V5 609 aaPredicted RBP16.91■□□□□ 0.3
RER1-203ENST00000378513 ADAT2Q7Z6V5 191 aaKnown RBP16.91■□□□□ 0.3
RER1-203ENST00000378513 SIAH1Q8IUQ4 282 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 RDH13Q8NBN7 331 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 RPGRIP1Q96KN7 1286 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 SH2D3AQ9BRG2 576 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
RER1-203ENST00000378513 EML1O00423 815 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 AKAP3O75969 853 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 GCNT3O95395 438 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 SERPING1P05155 500 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 AARSP49588 968 aaKnown RBP eCLIP16.9■□□□□ 0.3
RER1-203ENST00000378513 IQCEQ6IPM2 695 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 MMGT1Q8N4V1 131 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 FAM76AQ8TAV0 307 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 GJD4Q96KN9 370 aaPredicted RBP16.9■□□□□ 0.3
RER1-203ENST00000378513 CCDC43Q96MW1 224 aaKnown RBP16.9■□□□□ 0.3
RER1-203ENST00000378513 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
RER1-203ENST00000378513 LOC102724159A0A0B4J2E5 919 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 F5H6K3 240 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 CETN3O15182 167 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 TUBBP07437 444 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 ZNF76P36508 570 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 ICA1Q05084 483 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 KLRC3Q07444 240 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 COG2Q14746 738 aa16.9■□□□□ 0.3
RER1-203ENST00000378513 PWP2Q15269 919 aaKnown RBP16.9■□□□□ 0.3
RER1-203ENST00000378513 GPATCH4Q5T3I0 446 aaKnown RBP16.9■□□□□ 0.3
RER1-203ENST00000378513 GRID2IPA4D2P6 1211 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 SLC12A3P55017 1021 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 GIT2Q14161 759 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 NAA35Q5VZE5 725 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 RBM46Q8TBY0 533 aaKnown RBP16.89■□□□□ 0.29
RER1-203ENST00000378513 COA1Q9GZY4 146 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 TDRD3Q9H7E2 651 aaKnown RBP16.89■□□□□ 0.29
RER1-203ENST00000378513 ZEB2O60315 1214 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 SPATA31C1P0DKV0 1188 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 MCM3P25205 808 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 NMT1P30419 496 aaKnown RBP16.89■□□□□ 0.29
RER1-203ENST00000378513 MAGEA9P43362 315 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 PSMD2Q13200 908 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 PDCLQ13371 301 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 COBLL1Q53SF7 1204 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 TTMPQ5BVD1 217 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 ZIM3Q96PE6 472 aa16.89■□□□□ 0.29
RER1-203ENST00000378513 LCA5LO95447 670 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 SLC18A3Q16572 532 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 CFAP221Q4G0U5 840 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 TPH2Q8IWU9 490 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 OR2W6PQ8NHA6 318 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 NT5C3AQ9H0P0 336 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 EFCC1Q9HA90 598 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 ARMCX3Q9UH62 379 aaPredicted RBP16.88■□□□□ 0.29
RER1-203ENST00000378513 CHORDC1Q9UHD1 332 aaPredicted RBP16.88■□□□□ 0.29
RER1-203ENST00000378513 CEP104O60308 925 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 CFBP00751 764 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 GH2P01242 217 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 ECE1P42892 770 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 HLTFQ14527 1009 aaKnown RBP eCLIP16.88■□□□□ 0.29
RER1-203ENST00000378513 RRP1BQ14684 758 aaKnown RBP16.88■□□□□ 0.29
RER1-203ENST00000378513 CCDC174Q6PII3 467 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 DHX37Q8IY37 1157 aaKnown RBP16.88■□□□□ 0.29
RER1-203ENST00000378513 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 VIPAS39Q9H9C1 493 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 KCNMB3Q9NPA1 279 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 NDUFB10O96000 172 aa16.88■□□□□ 0.29
RER1-203ENST00000378513 GNGT1P63211 74 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms