RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PI16Q6UXB8 463 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 ARHGEF18Q6ZSZ5 1173 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 MYLK4Q86YV6 388 aaPredicted RBP12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 PI4K2BQ8TCG2 481 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 AK8Q96MA6 479 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 USP17L3A6NCW0 530 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 USP17L4A6NCW7 530 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 MSH2P43246 934 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 TMCO5AQ8N6Q1 288 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 FBXO41Q8TF61 875 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 OSBP2Q969R2 916 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 NT5C1BQ96P26 610 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 RRAGCQ9HB90 399 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 UBN1Q9NPG3 1134 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 HAUS2Q9NVX0 235 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 DENND3A2RUS2 1198 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 A6NJR5 290 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 TMEM191BP0C7N4 346 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 PLCG1P19174 1290 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 SLC16A2P36021 539 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 DR1Q01658 176 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 DACT3Q96B18 629 aaPredicted RBP12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 WRNIP1Q96S55 665 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 SHROOM2Q13796 1616 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 EIF3CLB5ME19 914 aaKnown RBP12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 LMNB2Q03252 620 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 HDAC11Q96DB2 347 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 EIF3CQ99613 913 aaKnown RBP12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 ZNF577Q9BSK1 485 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 PCDHA1Q9Y5I3 950 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 USP27XA6NNY8 438 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 KIF28PB7ZC32 967 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 STMN1P16949 149 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 ZNF18P17022 549 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 GGCXP38435 758 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 FAM160B1Q5W0V3 765 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 HIBCHQ6NVY1 386 aaPredicted RBP12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 METTL23Q86XA0 190 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 ZMYND12Q9H0C1 365 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 XAB2Q9HCS7 855 aaKnown RBP12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 MYO1FO00160 1098 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 TBC1D1Q86TI0 1168 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 TADA2BQ86TJ2 420 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 CDKL2Q92772 493 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 ATP10DQ9P241 1426 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 TRPA1O75762 1119 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 HSP90AA5PQ58FG0 334 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 CC2D1AQ6P1N0 951 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 ZNF449Q6P9G9 518 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 DNAJC17Q9NVM6 304 aaKnown RBP12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 KCNG1Q9UIX4 513 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 HACL1Q9UJ83 578 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 HMGB1P1B2RPK0 211 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 CACNB3P54284 484 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 UGGT1Q9NYU2 1555 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 PCP11498 1178 aaKnown RBP12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 IGFBP4P22692 258 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 ARHGAP4P98171 946 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 RSRC2Q7L4I2 434 aaKnown RBP12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 CDC26Q8NHZ8 85 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 FIS1Q9Y3D6 152 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 TOB2Q14106 344 aaPredicted RBP12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 UBE2SQ16763 222 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 ELP3Q9H9T3 547 aa12.93□□□□□ -0.34
PCDHA9-201ENST00000378122 ASPHQ12797 758 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 NECTIN1Q15223 517 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 TAF1CQ15572 869 aaPredicted RBP12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 FAM8A1Q9UBU6 413 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 ZHX2Q9Y6X8 837 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 ZNF804BA4D1E1 1349 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 RNF8O76064 485 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 HUNKP57058 714 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 ZBED6P86452 979 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 PDE1BQ01064 536 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 THOC1Q96FV9 657 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 ACCSQ96QU6 501 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 ZSWIM5Q9P217 1185 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 ADAM21Q9UKJ8 722 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 CPP00450 1065 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 NPR1P16066 1061 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 GAP43P17677 238 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 PDCLQ13371 301 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 PRPSAP1Q14558 356 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 EZH2Q15910 746 aaKnown RBP12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 MMS22LQ6ZRQ5 1243 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 MCF2L2Q86YR7 1114 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 PRDM15P57071 1507 aaPredicted RBP12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 CYP2D7A0A087X1C5 515 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 TOM1L1O75674 476 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 USP14P54578 494 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
PCDHA9-201ENST00000378122 DHX40Q8IX18 779 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms