RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 SNAI1O95863 264 aaPredicted RBP23.5■■□□□ 1.35
RNF38-205ENST00000377877 MYL1P05976 194 aa23.5■■□□□ 1.35
RNF38-205ENST00000377877 TGFB3P10600 412 aa23.5■■□□□ 1.35
RNF38-205ENST00000377877 JAK3P52333 1124 aa23.5■■□□□ 1.35
RNF38-205ENST00000377877 KMT5BQ4FZB7 885 aa23.5■■□□□ 1.35
RNF38-205ENST00000377877 ZNF467Q7Z7K2 595 aaPredicted RBP23.5■■□□□ 1.35
RNF38-205ENST00000377877 SMYD4Q8IYR2 804 aaPredicted RBP23.5■■□□□ 1.35
RNF38-205ENST00000377877 FAM200AQ8TCP9 573 aa23.5■■□□□ 1.35
RNF38-205ENST00000377877 DDX12PQ92771 950 aa23.5■■□□□ 1.35
RNF38-205ENST00000377877 BHMT2Q9H2M3 363 aa23.5■■□□□ 1.35
RNF38-205ENST00000377877 PCDHA10Q9Y5I2 948 aa23.5■■□□□ 1.35
RNF38-205ENST00000377877 WDR81Q562E7 1941 aa23.5■■□□□ 1.35
RNF38-205ENST00000377877 TBC1D8O95759 1140 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 ALDH1A1P00352 501 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 PTGS1P23219 599 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 VEGFBP49765 207 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 ACTR2P61160 394 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 IQCB1Q15051 598 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 CCDC62Q6P9F0 684 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 MAMDC4Q6UXC1 1216 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 SYT2Q8N9I0 419 aaPredicted RBP23.49■■□□□ 1.35
RNF38-205ENST00000377877 TRIML1Q8N9V2 468 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 DNAJC19Q96DA6 116 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 GJD2Q9UKL4 321 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 DIS3Q9Y2L1 958 aaKnown RBP23.49■■□□□ 1.35
RNF38-205ENST00000377877 EYA4O95677 639 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 CYP11B2P19099 503 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 SFNP31947 248 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 QARSP47897 775 aaKnown RBP23.49■■□□□ 1.35
RNF38-205ENST00000377877 ASIC1P78348 528 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 MAP2K5Q13163 448 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 TAPT1Q6NXT6 567 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 GPBP1Q86WP2 473 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 USP6NLQ92738 828 aa23.49■■□□□ 1.35
RNF38-205ENST00000377877 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.49■■□□□ 1.35
RNF38-205ENST00000377877 CD44P16070 742 aaKnown RBP23.48■■□□□ 1.35
RNF38-205ENST00000377877 MUTP22033 750 aa23.48■■□□□ 1.35
RNF38-205ENST00000377877 HSP90AA2PQ14568 343 aaPredicted RBP23.48■■□□□ 1.35
RNF38-205ENST00000377877 ABHD15Q6UXT9 468 aa23.48■■□□□ 1.35
RNF38-205ENST00000377877 COPS5Q92905 334 aa23.48■■□□□ 1.35
RNF38-205ENST00000377877 NACC1Q96RE7 527 aa23.48■■□□□ 1.35
RNF38-205ENST00000377877 ARHGAP39Q9C0H5 1083 aa23.48■■□□□ 1.35
RNF38-205ENST00000377877 KATNBL1Q9H079 304 aa23.48■■□□□ 1.35
RNF38-205ENST00000377877 ZSWIM4Q9H7M6 989 aa23.48■■□□□ 1.35
RNF38-205ENST00000377877 FARP2O94887 1054 aaPredicted RBP23.47■■□□□ 1.35
RNF38-205ENST00000377877 GGPS1O95749 300 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 RAD51AP2Q09MP3 1159 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 SWSAP1Q6NVH7 229 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 TRMT1LQ7Z2T5 733 aaKnown RBP23.47■■□□□ 1.35
RNF38-205ENST00000377877 NEK9Q8TD19 979 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 HPS3Q969F9 1004 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 TINF2Q9BSI4 451 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 POLD4Q9HCU8 107 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 FLRT1Q9NZU1 646 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 TCEAL9Q9UHQ7 104 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 CACNB1Q02641 598 aaPredicted RBP23.47■■□□□ 1.35
RNF38-205ENST00000377877 CNNM4Q6P4Q7 775 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 DHX40Q8IX18 779 aaKnown RBP23.47■■□□□ 1.35
RNF38-205ENST00000377877 SMAP1Q8IYB5 467 aaPredicted RBP23.47■■□□□ 1.35
RNF38-205ENST00000377877 RDM1Q8NG50 284 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 GDAQ9Y2T3 454 aa23.47■■□□□ 1.35
RNF38-205ENST00000377877 SYNGAP1Q96PV0 1343 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 TMEM150BA6NC51 233 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 ATG7O95352 703 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 TXNP10599 105 aaKnown RBP23.46■■□□□ 1.35
RNF38-205ENST00000377877 CAP1Q01518 475 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 NEDD9Q14511 834 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 KCNB1Q14721 858 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 KCTD17Q8N5Z5 321 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 RUSC1Q9BVN2 902 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 GABBR1Q9UBS5 961 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 ZSWIM8A7E2V4 1837 aa23.46■■□□□ 1.35
RNF38-205ENST00000377877 GSTTP1A0A1W2PQM5 241 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 PPP1R3GB7ZBB8 358 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 TNPO2O14787 897 aaKnown RBP23.45■■□□□ 1.35
RNF38-205ENST00000377877 RHOBTB3O94955 611 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 CAVIN2O95810 425 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 CYP2B6P20813 491 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 PSMC5P62195 406 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 CCL14Q16627 93 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 KCNV1Q6PIU1 500 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 CCDC60Q8IWA6 550 aaPredicted RBP23.45■■□□□ 1.35
RNF38-205ENST00000377877 MLKLQ8NB16 471 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 SH2D3AQ9BRG2 576 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 LRRC27Q9C0I9 530 aa23.45■■□□□ 1.35
RNF38-205ENST00000377877 ZNF236Q9UL36 1845 aa23.45■■□□□ 1.34
RNF38-205ENST00000377877 ZNF862O60290 1169 aa23.45■■□□□ 1.34
RNF38-205ENST00000377877 TRPA1O75762 1119 aa23.45■■□□□ 1.34
RNF38-205ENST00000377877 IDEP14735 1019 aa23.45■■□□□ 1.34
RNF38-205ENST00000377877 GJC2Q5T442 439 aaPredicted RBP23.45■■□□□ 1.34
RNF38-205ENST00000377877 ZNF658Q5TYW1 1059 aaPredicted RBP23.45■■□□□ 1.34
RNF38-205ENST00000377877 RINT1Q6NUQ1 792 aa23.45■■□□□ 1.34
RNF38-205ENST00000377877 REM2Q8IYK8 340 aaPredicted RBP23.45■■□□□ 1.34
RNF38-205ENST00000377877 GIMAP8Q8ND71 665 aaPredicted RBP23.45■■□□□ 1.34
RNF38-205ENST00000377877 MED15Q96RN5 788 aa23.45■■□□□ 1.34
RNF38-205ENST00000377877 MLXIPQ9HAP2 919 aa23.45■■□□□ 1.34
RNF38-205ENST00000377877 RMND1Q9NWS8 449 aa23.45■■□□□ 1.34
RNF38-205ENST00000377877 R3HCC1Q9Y3T6 440 aaKnown RBP23.45■■□□□ 1.34
RNF38-205ENST00000377877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.45■■□□□ 1.34
RNF38-205ENST00000377877 LYPLA2O95372 231 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms