RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 VSTM4Q8IW00 320 aa19.41■□□□□ 0.7
CLSTN1-202ENST00000377298 TTC31Q49AM3 519 aaPredicted RBP19.41■□□□□ 0.7
CLSTN1-202ENST00000377298 RSRC2Q7L4I2 434 aaKnown RBP19.41■□□□□ 0.7
CLSTN1-202ENST00000377298 NME8Q8N427 588 aa19.41■□□□□ 0.7
CLSTN1-202ENST00000377298 PASKQ96RG2 1323 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 A0A087WWV3 80 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 I3L4J1 428 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 CTNNA1P35221 906 aaKnown RBP19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 TCP11X2Q5H9J9 407 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 KIAA1586Q9HCI6 787 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 EIF3CLB5ME19 914 aaKnown RBP19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 RGS16O15492 202 aaPredicted RBP19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 USP11P51784 963 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 FAM133AQ8N9E0 248 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 EIF3CQ99613 913 aaKnown RBP19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 GFPT2O94808 682 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 MYCP01106 439 aaPredicted RBP19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 PADI6Q6TGC4 694 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 RAD54LQ92698 747 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 SERPING1P05155 500 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 ATF2P15336 505 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 STYK1Q6J9G0 422 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 FASTKD5Q7L8L6 764 aaKnown RBP19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 SPZ1Q9BXG8 430 aa19.4■□□□□ 0.7
CLSTN1-202ENST00000377298 P4HBP07237 508 aaKnown RBP19.39■□□□□ 0.7
CLSTN1-202ENST00000377298 VPS41P49754 854 aa19.39■□□□□ 0.7
CLSTN1-202ENST00000377298 OTUD5Q96G74 571 aa19.39■□□□□ 0.7
CLSTN1-202ENST00000377298 NRBP1Q9UHY1 535 aa19.39■□□□□ 0.7
CLSTN1-202ENST00000377298 CDC23Q9UJX2 597 aa19.39■□□□□ 0.7
CLSTN1-202ENST00000377298 DCCP43146 1447 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 STAT3P40763 770 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 CUL4BQ13620 913 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 CATSPER4Q7RTX7 472 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 PROM2Q8N271 834 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 FLT1P17948 1338 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 GUCY2FP51841 1108 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 OSTNP61366 133 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 EXOSC10Q01780 885 aaKnown RBP19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 TTLL4Q14679 1199 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 PPP1R13BQ96KQ4 1090 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 PLEKHA4Q9H4M7 779 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 KIAA1210Q9ULL0 1709 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 PDIA6Q15084 440 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 MICALL2Q8IY33 904 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 SLC16A10Q8TF71 515 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 TMEM260Q9NX78 707 aa19.39■□□□□ 0.69
CLSTN1-202ENST00000377298 H7C0C1 242 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 ATP5OP48047 213 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 FAM49AQ9H0Q0 323 aaPredicted RBP19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 ATP8B3O60423 1300 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 FBXO33Q7Z6M2 555 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 MTMR4Q9NYA4 1195 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 SYNJ2BP-COX16A0A087WUM0 186 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 QARSP47897 775 aaKnown RBP19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 KAZNQ674X7 775 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 DNAJC24Q6P3W2 148 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 SLC35F6Q8N357 371 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 DPH5Q9H2P9 285 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 COX16Q9P0S2 106 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 CNOT7Q9UIV1 285 aaKnown RBP19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 MAPK6Q16659 721 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 ADAT2Q7Z6V5 191 aaKnown RBP19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 GDAQ9Y2T3 454 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 KRT31Q15323 416 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 KIAA1841Q6NSI8 718 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 ARMCX2Q7L311 632 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 BANK1Q8NDB2 785 aa19.38■□□□□ 0.69
CLSTN1-202ENST00000377298 SFI1A8K8P3 1242 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 PANX2Q96RD6 677 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 LRRC4Q9HBW1 653 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 MYL3P08590 195 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 ITKQ08881 620 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 SEMA3FQ13275 785 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 SFR1Q86XK3 245 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 C7orf31Q8N865 590 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 MB21D1Q8N884 522 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 DYDC2Q96IM9 177 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 SEL1LQ9UBV2 794 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 GOLGA8IPA6NC78 632 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 GOLGA8JA6NMD2 632 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 FCER1AP12319 257 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 BBS5Q8N3I7 341 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 SEPT10Q9P0V9 454 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 PFDN6O15212 129 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 EIF4A3P38919 411 aaKnown RBP19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 PHKA2P46019 1235 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 TNFAIP2Q03169 654 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 STOX1Q6ZVD7 989 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 RBM46Q8TBY0 533 aaKnown RBP19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 LPAR1Q92633 364 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 RPAP3Q9H6T3 665 aaPredicted RBP19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 ZNF302Q9NR11 478 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 PYCARDQ9ULZ3 195 aa19.37■□□□□ 0.69
CLSTN1-202ENST00000377298 TYW5A2RUC4 315 aaKnown RBP19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 GOLGA8SH3BPF8 625 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 IPO5O00410 1097 aaKnown RBP19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 LDHDQ86WU2 507 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 RFX6Q8HWS3 928 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms