RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ZYXQ15942 572 aaKnown RBP17.86■□□□□ 0.45
TRIM27-202ENST00000377199 KCTD16Q68DU8 428 aa17.86■□□□□ 0.45
TRIM27-202ENST00000377199 KRT12Q99456 494 aa17.86■□□□□ 0.45
TRIM27-202ENST00000377199 EHD4Q9H223 541 aa17.86■□□□□ 0.45
TRIM27-202ENST00000377199 TDRD3Q9H7E2 651 aaKnown RBP17.86■□□□□ 0.45
TRIM27-202ENST00000377199 KCNMB3Q9NPA1 279 aa17.86■□□□□ 0.45
TRIM27-202ENST00000377199 GOLGA6AQ9NYA3 693 aa17.86■□□□□ 0.45
TRIM27-202ENST00000377199 STIM2Q9P246 746 aa17.86■□□□□ 0.45
TRIM27-202ENST00000377199 SLC12A3P55017 1021 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 PTK2Q05397 1052 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 CTTNQ14247 550 aaKnown RBP17.85■□□□□ 0.45
TRIM27-202ENST00000377199 TRADDQ15628 312 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 TSEN2Q8NCE0 465 aaKnown RBP17.85■□□□□ 0.45
TRIM27-202ENST00000377199 RUFY1Q96T51 708 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 EPB41L5Q9HCM4 733 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 ARMCX3Q9UH62 379 aaPredicted RBP17.85■□□□□ 0.45
TRIM27-202ENST00000377199 NFU1Q9UMS0 254 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 BCS1LQ9Y276 419 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 LCA5LO95447 670 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 GH2P01242 217 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 GLI1P08151 1106 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 CFAP221Q4G0U5 840 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 SH3BP5LQ7L8J4 393 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 FBXO11Q86XK2 927 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 MMGT1Q8N4V1 131 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 AMNQ9BXJ7 453 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 VIPAS39Q9H9C1 493 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 ABCB11O95342 1321 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 ZC3H4Q9UPT8 1303 aaKnown RBP17.85■□□□□ 0.45
TRIM27-202ENST00000377199 SSU72P8A0A1W2PR75 194 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 CFBP00751 764 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 CARSP49589 748 aaKnown RBP17.85■□□□□ 0.45
TRIM27-202ENST00000377199 GIT2Q14161 759 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 LRRC31Q6UY01 552 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 AENQ8WTP8 325 aaKnown RBP17.85■□□□□ 0.45
TRIM27-202ENST00000377199 CEP63Q96MT8 703 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 FAM198AQ9UFP1 575 aa17.85■□□□□ 0.45
TRIM27-202ENST00000377199 TMCO5BA8MYB1 307 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 HEXIM1O94992 359 aaKnown RBP17.84■□□□□ 0.45
TRIM27-202ENST00000377199 NDUFB10O96000 172 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 JAG1P78504 1218 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 PLS1Q14651 629 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 SLC18A3Q16572 532 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 RUSC1Q9BVN2 902 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 NHSQ6T4R5 1651 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 KCNK3O14649 394 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 AKAP3O75969 853 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 MMP10P09238 476 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 XRCC5P13010 732 aaKnown RBP17.84■□□□□ 0.45
TRIM27-202ENST00000377199 MUM1L1Q5H9M0 696 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 SIAH1Q8IUQ4 282 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 TPH2Q8IWU9 490 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.84■□□□□ 0.45
TRIM27-202ENST00000377199 PI4KBQ9UBF8 816 aa17.84■□□□□ 0.45
TRIM27-202ENST00000377199 SPATA31C1P0DKV0 1188 aa17.83■□□□□ 0.45
TRIM27-202ENST00000377199 POLD1P28340 1107 aa17.83■□□□□ 0.45
TRIM27-202ENST00000377199 AARSP49588 968 aaKnown RBP eCLIP17.83■□□□□ 0.45
TRIM27-202ENST00000377199 ABCB5Q2M3G0 1257 aa17.83■□□□□ 0.45
TRIM27-202ENST00000377199 CCDC174Q6PII3 467 aa17.83■□□□□ 0.45
TRIM27-202ENST00000377199 SLFN12Q8IYM2 578 aa17.83■□□□□ 0.45
TRIM27-202ENST00000377199 ERMNQ8TAM6 284 aa17.83■□□□□ 0.45
TRIM27-202ENST00000377199 FAM76AQ8TAV0 307 aa17.83■□□□□ 0.45
TRIM27-202ENST00000377199 CCDC17Q96LX7 622 aa17.83■□□□□ 0.45
TRIM27-202ENST00000377199 TBCAO75347 108 aaKnown RBP17.83■□□□□ 0.44
TRIM27-202ENST00000377199 KRT14P02533 472 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 FAM153BP0C7A2 387 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 USP11P51784 963 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 EXOC3L4Q17RC7 722 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 FAM153CQ494X1 144 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 HHIPL2Q6UWX4 724 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 MAEAQ7L5Y9 396 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 ETNPPLQ8TBG4 499 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 LUC7LQ9NQ29 371 aaKnown RBP17.83■□□□□ 0.44
TRIM27-202ENST00000377199 PKD2L1Q9P0L9 805 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 FAM153AQ9UHL3 310 aa17.83■□□□□ 0.44
TRIM27-202ENST00000377199 MYO1CO00159 1063 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 EML1O00423 815 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 MSH4O15457 936 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 PJA2O43164 708 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 GNA14O95837 355 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 KNOP1Q1ED39 458 aaKnown RBP17.82■□□□□ 0.44
TRIM27-202ENST00000377199 ZC2HC1CQ53FD0 456 aaPredicted RBP17.82■□□□□ 0.44
TRIM27-202ENST00000377199 ZNF571Q7Z3V5 609 aaPredicted RBP17.82■□□□□ 0.44
TRIM27-202ENST00000377199 SH2D3CQ8N5H7 860 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 RRP15Q9Y3B9 282 aaKnown RBP17.82■□□□□ 0.44
TRIM27-202ENST00000377199 UCHL3P15374 230 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 HOXD13P35453 343 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 ECE1P42892 770 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 SPIRE1Q08AE8 756 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 RDH13Q8NBN7 331 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 AJAP1Q9UKB5 411 aaPredicted RBP17.82■□□□□ 0.44
TRIM27-202ENST00000377199 NMT1P30419 496 aaKnown RBP17.82■□□□□ 0.44
TRIM27-202ENST00000377199 NAB2Q15742 525 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 HYIQ5T013 277 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 ARL8AQ96BM9 186 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 AP1M1Q9BXS5 423 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 GANQ9H2C0 597 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 CENPHQ9H3R5 247 aa17.82■□□□□ 0.44
TRIM27-202ENST00000377199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.82■□□□□ 0.443e-9■■■■■ 59.9
TRIM27-202ENST00000377199 SUGT1Q9Y2Z0 365 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms