RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 SELENOSQ9BQE4 189 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 STK17AQ9UEE5 414 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
HDAC6-203ENST00000376619 SHMT1P34896 483 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 FUT2Q10981 343 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 EIF2AK1Q9BQI3 630 aaKnown RBP12.18□□□□□ -0.46
HDAC6-203ENST00000376619 REEP2Q9BRK0 252 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 MED24O75448 989 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 KIAA0754O94854 1291 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 CASP4P49662 377 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 SOX10P56693 466 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 MAP2K1Q02750 393 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-203ENST00000376619 C2CD6Q53TS8 623 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 APOBEC3HQ6NTF7 200 aaKnown RBP12.18□□□□□ -0.46
HDAC6-203ENST00000376619 SUPT20HQ8NEM7 779 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 TRIM58Q8NG06 486 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 THAP9Q9H5L6 903 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 PALMO75781 387 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 MTMR2Q13614 643 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 EPC2Q52LR7 807 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
HDAC6-203ENST00000376619 PLA2G4FQ68DD2 849 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 TICAM2Q86XR7 235 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 BCAS3Q9H6U6 928 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 PARVGQ9HBI0 331 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 PIM2Q9P1W9 311 aa12.18□□□□□ -0.46
HDAC6-203ENST00000376619 PHLPP2Q6ZVD8 1323 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 KRIT1O00522 736 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 H2AFZP0C0S5 128 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-203ENST00000376619 SNX1Q13596 522 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 ALKBH5Q6P6C2 394 aaKnown RBP12.17□□□□□ -0.46
HDAC6-203ENST00000376619 H2AFVQ71UI9 128 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 CDR2LQ86X02 465 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-203ENST00000376619 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 SEMA6BQ9H3T3 888 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 TRIP13Q15645 432 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-203ENST00000376619 Q3C1V9 767 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 ZBTB33Q86T24 672 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 GLYCTKQ8IVS8 523 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 MTA3Q9BTC8 594 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 RIC8AQ9NPQ8 531 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 GPRC5CQ9NQ84 441 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 MRC1P22897 1456 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 AFPP02771 609 aaKnown RBP12.17□□□□□ -0.46
HDAC6-203ENST00000376619 TUBB4AP04350 444 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 RCAN1P53805 252 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 PPP1R7Q15435 360 aa12.17□□□□□ -0.46
HDAC6-203ENST00000376619 GIMAP8Q8ND71 665 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-203ENST00000376619 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 GOLGA6CA6NDK9 693 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 PEX10O60683 326 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 N4BP1O75113 896 aaKnown RBP12.16□□□□□ -0.46
HDAC6-203ENST00000376619 FOSP01100 380 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-203ENST00000376619 GOLGA6DP0CG33 693 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 SRGAP2CP0DJJ0 459 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 IRX3P78415 501 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-203ENST00000376619 RETREG2Q8NC44 543 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 LXNQ9BS40 222 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 GLT8D2Q9H1C3 349 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 GOLGA6AQ9NYA3 693 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 NR3C1P04150 777 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 TMOD1P28289 359 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 COPB2P35606 906 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 TRAF1Q13077 416 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 STRIP1Q5VSL9 837 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 PASD1Q8IV76 773 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 TADA3O75528 432 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 IFNB1P01574 187 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 CD58P19256 250 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 MTM1Q13496 603 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 KAZNQ674X7 775 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 KIAA0895Q8NCT3 520 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 MED15Q96RN5 788 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 TAOK3Q9H2K8 898 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 CUEDC2Q9H467 287 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 NFU1Q9UMS0 254 aa12.16□□□□□ -0.46
HDAC6-203ENST00000376619 COL22A1Q8NFW1 1626 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-203ENST00000376619 RHOBTB3O94955 611 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 HEXIM1O94992 359 aaKnown RBP12.15□□□□□ -0.46
HDAC6-203ENST00000376619 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 INPP5BP32019 993 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 SEZ6Q53EL9 994 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 MGARPQ8TDB4 240 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 IFT74Q96LB3 600 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 ADAM33Q9BZ11 813 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 PPANQ9NQ55 473 aaKnown RBP12.15□□□□□ -0.46
HDAC6-203ENST00000376619 ASNSP08243 561 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 GCFC2P16383 781 aaKnown RBP12.15□□□□□ -0.46
HDAC6-203ENST00000376619 ZNF18P17022 549 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 MTMR1Q13613 665 aa12.15□□□□□ -0.46
HDAC6-203ENST00000376619 SNRNP48Q6IEG0 339 aaKnown RBP12.15□□□□□ -0.46
HDAC6-203ENST00000376619 CC2D1AQ6P1N0 951 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-203ENST00000376619 CCDC105Q8IYK2 499 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms