RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KLHDC7AQ5VTJ3 777 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 LRCH2Q5VUJ6 765 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 KCTD1Q719H9 257 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 C1orf131Q8NDD1 294 aaKnown RBP14.18□□□□□ -0.14
MSH5-204ENST00000375755 MTMR8Q96EF0 704 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 CNOT6LQ96LI5 555 aaKnown RBP14.18□□□□□ -0.14
MSH5-204ENST00000375755 TMBIM4Q9HC24 238 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 SLC24A3Q9HC58 644 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 BARHL2Q9NY43 387 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 A0A1W2PQJ5 194 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 BACH1O14867 736 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 GDF11O95390 407 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 CLNS1AP54105 237 aaKnown RBP14.18□□□□□ -0.14
MSH5-204ENST00000375755 CRYMQ14894 314 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 PLAGL2Q9UPG8 496 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 GMNCA6NCL1 334 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 BUB1O43683 1085 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 MTIF2P46199 727 aaKnown RBP14.18□□□□□ -0.14
MSH5-204ENST00000375755 NOVP48745 357 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 BYSLQ13895 437 aaKnown RBP14.18□□□□□ -0.14
MSH5-204ENST00000375755 CFAP221Q4G0U5 840 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 MAGEC3Q8TD91 643 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 NOC4LQ9BVI4 516 aaKnown RBP14.18□□□□□ -0.14
MSH5-204ENST00000375755 TMEM60Q9H2L4 133 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 TMEM260Q9NX78 707 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 CLRN2A0PK11 232 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 PP2D1A8MPX8 630 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 PPP1R12AO14974 1030 aaPredicted RBP14.17□□□□□ -0.14
MSH5-204ENST00000375755 EZRP15311 586 aaKnown RBP14.17□□□□□ -0.14
MSH5-204ENST00000375755 HNRNPH3P31942 346 aaKnown RBP14.17□□□□□ -0.14
MSH5-204ENST00000375755 DNA2P51530 1060 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
MSH5-204ENST00000375755 KCNB1Q14721 858 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 FIGNQ5HY92 759 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 CDAN1Q8IWY9 1227 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 GIMAP8Q8ND71 665 aaPredicted RBP14.17□□□□□ -0.14
MSH5-204ENST00000375755 NOC3LQ8WTT2 800 aaKnown RBP14.17□□□□□ -0.14
MSH5-204ENST00000375755 ERGIC2Q96RQ1 377 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
MSH5-204ENST00000375755 AKR1B10O60218 316 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 ATP2C2O75185 946 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 RTN2O75298 545 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 CLSTN1O94985 981 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 LCA5LO95447 670 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 MAGEA1P43355 309 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 SCTRP47872 440 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 NAPAP54920 295 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 CCDC178Q5BJE1 867 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 CCDC50Q8IVM0 306 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 KRT12Q99456 494 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 PLIN2Q99541 437 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 DISC1Q9NRI5 854 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 SLC12A6Q9UHW9 1150 aa14.17□□□□□ -0.14
MSH5-204ENST00000375755 TRAPPC3O43617 180 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 TMOD1P28289 359 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 ANKRD40Q6AI12 368 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 TTLL6Q8N841 843 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 C4orf32Q8N8J7 132 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 OR2W6PQ8NHA6 318 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 UPF1Q92900 1129 aaKnown RBP eCLIP14.16□□□□□ -0.14
MSH5-204ENST00000375755 SEC16BQ96JE7 1060 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 BIN2Q9UBW5 565 aaPredicted RBP14.16□□□□□ -0.14
MSH5-204ENST00000375755 RHOBTB3O94955 611 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 TAL1P17542 331 aaPredicted RBP14.16□□□□□ -0.14
MSH5-204ENST00000375755 HSPA9P38646 679 aaKnown RBP14.16□□□□□ -0.14
MSH5-204ENST00000375755 GNAQP50148 359 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 CDC37Q16543 378 aaPredicted RBP14.16□□□□□ -0.14
MSH5-204ENST00000375755 WHAMMQ8TF30 809 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 SPZ1Q9BXG8 430 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 ATP6V0A4Q9HBG4 840 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.16□□□□□ -0.14
MSH5-204ENST00000375755 SMCO2A6NFE2 343 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 TCP10L2B9ZVM9 353 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 PPP1R11O60927 126 aaPredicted RBP14.16□□□□□ -0.14
MSH5-204ENST00000375755 SNAP25P60880 206 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 RASSF7Q02833 373 aa14.16□□□□□ -0.14
MSH5-204ENST00000375755 FAM207AQ9NSI2 230 aaPredicted RBP14.16□□□□□ -0.14
MSH5-204ENST00000375755 PPP1R1BQ9UD71 204 aaPredicted RBP14.16□□□□□ -0.14
MSH5-204ENST00000375755 C10orf71Q711Q0 1435 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 PJA2O43164 708 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
MSH5-204ENST00000375755 TTLL1O95922 423 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 HLA-DOAP06340 250 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 RPSAP08865 295 aaKnown RBP14.15□□□□□ -0.14
MSH5-204ENST00000375755 LONP1P36776 959 aaKnown RBP14.15□□□□□ -0.14
MSH5-204ENST00000375755 NAIF1Q69YI7 327 aaPredicted RBP14.15□□□□□ -0.14
MSH5-204ENST00000375755 SIAH1Q8IUQ4 282 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 ARFGAP2Q8N6H7 521 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 LRRC15Q8TF66 581 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 P2RX5Q93086 422 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 RNASE9P60153 205 aaKnown RBP14.15□□□□□ -0.14
MSH5-204ENST00000375755 XRCC4Q13426 336 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 SEPT2Q15019 361 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 CCDC155Q8N6L0 562 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 DHTKD1Q96HY7 919 aaPredicted RBP14.15□□□□□ -0.14
MSH5-204ENST00000375755 NOX5Q96PH1 765 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 TRIM6Q9C030 488 aaPredicted RBP14.15□□□□□ -0.14
MSH5-204ENST00000375755 PLCB1Q9NQ66 1216 aa14.15□□□□□ -0.14
MSH5-204ENST00000375755 PLIN4Q96Q06 1357 aa14.15□□□□□ -0.15
MSH5-204ENST00000375755 KIF13BQ9NQT8 1826 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms