RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 RAD51AP2Q09MP3 1159 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TBC1D8BQ0IIM8 1120 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 VGLL4Q14135 290 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 EDRF1Q3B7T1 1238 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 VWA3BQ502W6 1294 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 SNRNP48Q6IEG0 339 aaKnown RBP19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 C1orf186Q6ZWK4 172 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 SFR1Q86XK3 245 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TMTC1Q8IUR5 882 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ZFP91Q96JP5 570 aaPredicted RBP19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RMDN3Q96TC7 470 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TTYH3Q9C0H2 523 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 OLFML3Q9NRN5 406 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TBC1D22BQ9NU19 505 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TBC1D7Q9P0N9 293 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RIPK3Q9Y572 518 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 SCN4AP35499 1836 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RNF225M0QZC1 329 aaPredicted RBP19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 PES1O00541 588 aaKnown RBP19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TBCAO75347 108 aaKnown RBP19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 EIF2AK2P19525 551 aaKnown RBP19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ITGB3BPQ13352 177 aaPredicted RBP19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 MTMR1Q13613 665 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 FKBP15Q5T1M5 1219 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TOGARAM2Q6ZUX3 1019 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 SULF1Q8IWU6 871 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 EEF2KMTQ96G04 330 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 DNAJC7Q99615 494 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 LXNQ9BS40 222 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TEX13BQ9BXU2 312 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 HOXC10Q9NYD6 342 aa19.93■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TTC26A0AVF1 554 aa19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RIOK3O14730 519 aaKnown RBP19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 KRT9P35527 623 aa19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TMEM132BQ14DG7 1078 aa19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 NSMFQ6X4W1 530 aa19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 MIER3Q7Z3K6 550 aa19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 KIF18AQ8NI77 898 aa19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 PIGOQ8TEQ8 1089 aa19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 NDST4Q9H3R1 872 aa19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TRAF3IP3Q9Y228 551 aa19.92■□□□□ 0.78
HLA-DQB1-201ENST00000374943 SOWAHDA6NJG2 315 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 SPDYE16A6NNV3 312 aaPredicted RBP19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TRAF5O00463 557 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 DYNC1I1O14576 645 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 BAATQ14032 418 aaPredicted RBP19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 SYCP1Q15431 976 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ARHGEF16Q5VV41 709 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 CYP26C1Q6V0L0 522 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RAD9BQ6WBX8 426 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 L3MBTL3Q96JM7 780 aaPredicted RBP19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ZHX3Q9H4I2 956 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 WRAP73Q9P2S5 460 aaPredicted RBP19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 SEL1LQ9UBV2 794 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ODF2LQ9ULJ1 636 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 LUC7L2Q9Y383 392 aaKnown RBP19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ARID2Q68CP9 1835 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 A0A1W2PQJ5 194 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RSPH10B2B2RC85 870 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 PPP1R12BO60237 982 aaPredicted RBP19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 LYPLA2O95372 231 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 P4HBP07237 508 aaKnown RBP19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 CCDC175P0C221 793 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RSPH10BP0C881 870 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 CASP5P51878 434 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ZNF131P52739 623 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ETF1P62495 437 aaKnown RBP19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 C9orf131Q5VYM1 1079 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 OR8K1Q8NGG5 319 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ACAD9Q9H845 621 aa19.91■□□□□ 0.78
HLA-DQB1-201ENST00000374943 DOCK5Q9H7D0 1870 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 UBE4BO95155 1302 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RASSF10A6NK89 507 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ADM5C9JUS6 153 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 PDXKO00764 312 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 NKRFO15226 690 aaKnown RBP eCLIP19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 EIF3DO15371 548 aaKnown RBP eCLIP19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 GUCY2CP25092 1073 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 CCND2P30279 289 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 KNOP1Q1ED39 458 aaKnown RBP19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 VSIG10LQ86VR7 867 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 NELFCDQ8IXH7 590 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 GPRASP2Q96D09 838 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ZSWIM4Q9H7M6 989 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 SIK3Q9Y2K2 1263 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 CSADQ9Y600 493 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 ADGRG1Q9Y653 693 aa19.9■□□□□ 0.78
HLA-DQB1-201ENST00000374943 PHLPP2Q6ZVD8 1323 aa19.89■□□□□ 0.78
HLA-DQB1-201ENST00000374943 FAM13AO94988 1023 aa19.89■□□□□ 0.77
HLA-DQB1-201ENST00000374943 ERVK-24P63145 666 aa19.89■□□□□ 0.77
HLA-DQB1-201ENST00000374943 PRKG1Q13976 671 aa19.89■□□□□ 0.77
HLA-DQB1-201ENST00000374943 MTF1Q14872 753 aa19.89■□□□□ 0.77
HLA-DQB1-201ENST00000374943 TRIM65Q6PJ69 517 aa19.89■□□□□ 0.77
HLA-DQB1-201ENST00000374943 DBR1Q9UK59 544 aaKnown RBP19.89■□□□□ 0.77
HLA-DQB1-201ENST00000374943 DDX39AO00148 427 aaKnown RBP19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 MAFGO15525 162 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 MYCLP12524 364 aaPredicted RBP19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 TRIM21P19474 475 aaKnown RBP19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 HOXD13P35453 343 aa19.88■□□□□ 0.77
HLA-DQB1-201ENST00000374943 IREB2P48200 963 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms