RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 ECHDC1Q9NTX5 307 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 TMEM260Q9NX78 707 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 MAP3K20Q9NYL2 800 aaKnown RBP10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 COL20A1Q9P218 1284 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 LIMD1Q9UGP4 676 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 LRFN2Q9ULH4 789 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 USTQ9Y2C2 406 aa10.93□□□□□ -0.66
HLA-DOA-202ENST00000374813 ASPMQ8IZT6 3477 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 CCDC171Q6TFL3 1326 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 PLXNA4Q9HCM2 1894 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 M0R2C6 588 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 PI15O43692 258 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 ORC4O43929 436 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 FGF18O76093 207 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 SNHG28P0DPA3 235 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 RLBP1P12271 317 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 MYCLP12524 364 aaPredicted RBP10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 SP2Q02086 613 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 PAN2Q504Q3 1202 aaKnown RBP10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 FBXO47Q5MNV8 452 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 CWF19L1Q69YN2 538 aaKnown RBP10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 VSIG10LQ86VR7 867 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 GPR161Q8N6U8 529 aaKnown RBP10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 TDRD5Q8NAT2 981 aaKnown RBP10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 CASP10Q92851 521 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 APOL5Q9BWW9 433 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 ANAPC4Q9UJX5 808 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 LZTS1Q9Y250 596 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 SQORQ9Y6N5 450 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 KIAA1671Q9BY89 1806 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 USP24Q9UPU5 2620 aa10.92□□□□□ -0.66
HLA-DOA-202ENST00000374813 FSCN2O14926 492 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 SORBS3O60504 671 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 CFBP00751 764 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 ASGR2P07307 311 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 FGRP09769 529 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 SCG2P13521 617 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 NPR3P17342 541 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 UBA1P22314 1058 aaKnown RBP10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 ERVFC1P60507 584 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 NEDD9Q14511 834 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 STOX1Q6ZVD7 989 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 THNSL1Q8IYQ7 743 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 SAMD3Q8N6K7 520 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 LMBR1Q8WVP7 490 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 GPATCH3Q96I76 525 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 PDCD2LQ9BRP1 358 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 LRRCC1Q9C099 1032 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 POMKQ9H5K3 350 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 TOMM22Q9NS69 142 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 FBXL21Q9UKT6 434 aa10.91□□□□□ -0.66
HLA-DOA-202ENST00000374813 MYH6P13533 1939 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 STK25O00506 426 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 MGAT3Q09327 533 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 CDC37Q16543 378 aaPredicted RBP10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 ATAT1Q5SQI0 421 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 IER5Q5VY09 327 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 LLGL2Q6P1M3 1020 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 RTN4RL1Q86UN2 441 aaPredicted RBP10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 ACSF2Q96CM8 615 aaPredicted RBP10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 CHAMP1Q96JM3 812 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 SMOC2Q9H3U7 446 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 CYP26B1Q9NR63 512 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 PCDHB7Q9Y5E2 793 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 R4GN57 208 aa10.9□□□□□ -0.66
HLA-DOA-202ENST00000374813 FASNP49327 2511 aaKnown RBP10.9□□□□□ -0.67
HLA-DOA-202ENST00000374813 PRR5-ARHGAP8B1AHC4 643 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 CCND2P30279 289 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 CD52P31358 61 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 HSD17B4P51659 736 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 ARHGAP8P85298 464 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 PLCB3Q01970 1234 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 KRT17Q04695 432 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 TDGQ13569 410 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 PGM5Q15124 567 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 GNPTABQ3T906 1256 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 PLPP4Q5VZY2 271 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 METTL7BQ6UX53 244 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 SIX5Q8N196 739 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 MRPS27Q92552 414 aaKnown RBP10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 TCF25Q9BQ70 676 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 UBA5Q9GZZ9 404 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 ENTPD7Q9NQZ7 604 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 DBR1Q9UK59 544 aaKnown RBP10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 FANCMQ8IYD8 2048 aa10.89□□□□□ -0.67
HLA-DOA-202ENST00000374813 CACNA1IQ9P0X4 2223 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 GPR179Q6PRD1 2367 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 M0QZ92 97 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 STAM2O75886 525 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 EOMESO95936 686 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 RFX1P22670 979 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 ATXN1P54253 815 aaKnown RBP10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 GHRHRQ02643 423 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 RRP12Q5JTH9 1297 aaKnown RBP10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 CYFIP1Q7L576 1253 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 TMC7Q7Z402 723 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 SIRT2Q8IXJ6 389 aa10.88□□□□□ -0.67
HLA-DOA-202ENST00000374813 ADGRF4Q8IZF3 695 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms