RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 SH3GLB2Q9NR46 395 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 TXLNGQ9NUQ3 528 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 SCOCQ9UIL1 159 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 H0YCG3 227 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 LIG4P49917 911 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 STAT2P52630 851 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 GOLGA8FQ08AF8 430 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 GOLGA8DPQ0D2H9 430 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 SYDE2Q5VT97 1194 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 ATP8A1Q9Y2Q0 1164 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 ALS2CLQ60I27 953 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 FNBP4Q8N3X1 1017 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 DACT3Q96B18 629 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 GPC4O75487 556 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 CYP2D6P10635 497 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 RSPH3Q86UC2 560 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 NCAPGQ9BPX3 1015 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 MAD1L1Q9Y6D9 718 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 NWD1Q149M9 1564 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 C2orf54Q08AI8 447 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 MESDQ14696 234 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 KAZNQ674X7 775 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 SPTLC3Q9NUV7 552 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 EIF3CLB5ME19 914 aaKnown RBP13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 RNF8O76064 485 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 SLC16A2P36021 539 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 NR5A1Q13285 461 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 TAF11Q15544 211 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 SUDS3Q9H7L9 328 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 EPS15L1Q9UBC2 864 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 NOD1Q9Y239 953 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 PNMA6FA0A0J9YX94 578 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 MYO1FO00160 1098 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 SKIP12755 728 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 ARMCX5Q6P1M9 558 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 RASGRP4Q8TDF6 673 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 TUBB6Q9BUF5 446 aa13.29□□□□□ -0.28
NPLOC4-202ENST00000374747 GUCY2CP25092 1073 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 PLTPP55058 493 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 ESRRGP62508 458 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 CASP8Q14790 479 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 TBCKQ8TEA7 893 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 KDM4FA0A1W2PPD8 638 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 TNNC2P02585 160 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 DRC3Q9H069 523 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 NR1D1P20393 614 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 MYL7Q01449 175 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 DHX9Q08211 1270 aaKnown RBP13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 ZNF277Q9NRM2 450 aaPredicted RBP13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 BPIFB4P59827 614 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 PHEXP78562 749 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 PDE1BQ01064 536 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 TCP11X2Q5H9J9 407 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 MUM1L1Q5H9M0 696 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 DCAF4Q8WV16 495 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 P2RX5Q93086 422 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 MLXIPQ9HAP2 919 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 IFT122Q9HBG6 1241 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 CD2APQ9Y5K6 639 aa13.28□□□□□ -0.28
NPLOC4-202ENST00000374747 ASNSP08243 561 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 TAB3Q8N5C8 712 aaPredicted RBP13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 GLG1Q92896 1179 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 UBR1Q8IWV7 1749 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 H7C0C1 242 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 ECEL1O95672 775 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 HSPA6P17066 643 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 ATP5OP48047 213 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 VSTM4Q8IW00 320 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 MAP7D3Q8IWC1 876 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 GJA10Q969M2 543 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 PBKQ96KB5 322 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 LY9Q9HBG7 655 aa13.27□□□□□ -0.28
NPLOC4-202ENST00000374747 PIK3C2AO00443 1686 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 ORC4O43929 436 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 DLATP10515 647 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 MFAP3P55082 362 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 PTK2Q05397 1052 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 MAN2A1Q16706 1144 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 HIBCHQ6NVY1 386 aaPredicted RBP13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 INTS5Q6P9B9 1019 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 ZBTB8OSQ8IWT0 167 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 ACRBPQ8NEB7 543 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 TBC1D16Q8TBP0 767 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 TRIM11Q96F44 468 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 SRPRBQ9Y5M8 271 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 SLMAPQ14BN4 828 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 N4BP2L2Q92802 583 aaPredicted RBP13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 COA7Q96BR5 231 aa13.27□□□□□ -0.29
NPLOC4-202ENST00000374747 HDAC11Q96DB2 347 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms