RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 TRIM60Q495X7 471 aa17.13■□□□□ 0.33
PFDN6-203ENST00000374610 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
PFDN6-203ENST00000374610 NFRKBQ6P4R8 1299 aa17.13■□□□□ 0.33
PFDN6-203ENST00000374610 PLPPR4Q7Z2D5 763 aa17.13■□□□□ 0.33
PFDN6-203ENST00000374610 KAT2BQ92831 832 aa17.13■□□□□ 0.33
PFDN6-203ENST00000374610 ATP6V0A1Q93050 837 aa17.13■□□□□ 0.33
PFDN6-203ENST00000374610 MTMR9Q96QG7 549 aa17.13■□□□□ 0.33
PFDN6-203ENST00000374610 ATP6V1DQ9Y5K8 247 aa17.13■□□□□ 0.33
PFDN6-203ENST00000374610 EMSYQ7Z589 1322 aa17.13■□□□□ 0.33
PFDN6-203ENST00000374610 LGR5O75473 907 aa17.12■□□□□ 0.33
PFDN6-203ENST00000374610 NUCB2P80303 420 aa17.12■□□□□ 0.33
PFDN6-203ENST00000374610 PTPN11Q06124 597 aaPredicted RBP17.12■□□□□ 0.33
PFDN6-203ENST00000374610 PKP1Q13835 747 aa17.12■□□□□ 0.33
PFDN6-203ENST00000374610 CCDC60Q8IWA6 550 aaPredicted RBP17.12■□□□□ 0.33
PFDN6-203ENST00000374610 C7orf61Q8IZ16 206 aa17.12■□□□□ 0.33
PFDN6-203ENST00000374610 PPP1R13LQ8WUF5 828 aa17.12■□□□□ 0.33
PFDN6-203ENST00000374610 PRDM5Q9NQX1 630 aaPredicted RBP17.12■□□□□ 0.33
PFDN6-203ENST00000374610 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
PFDN6-203ENST00000374610 VAV3Q9UKW4 847 aa17.12■□□□□ 0.33
PFDN6-203ENST00000374610 POTEB3A0JP26 581 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 C17orf102A2RUQ5 167 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 SMIM10L2AP0DMW4 78 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 SMIM10L2BP0DMW5 78 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 NCLP19338 710 aaKnown RBP17.11■□□□□ 0.33
PFDN6-203ENST00000374610 PRPHP41219 470 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 STK38Q15208 465 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 EPHA7Q15375 998 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 C1orf53Q5VUE5 145 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 POTEBQ6S5H4 581 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 FAM167AQ96KS9 214 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 NRBP2Q9NSY0 501 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 HDAC6Q9UBN7 1215 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 NR2E3Q9Y5X4 410 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
PFDN6-203ENST00000374610 VWA3AA6NCI4 1184 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 POTEMA6NI47 508 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 HAS3O00219 553 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 EML1O00423 815 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 BRD1O95696 1058 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
PFDN6-203ENST00000374610 RGS19P49795 217 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 PSMC5P62195 406 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 IGBP1P78318 339 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 ATP2C1P98194 919 aaPredicted RBP17.1■□□□□ 0.33
PFDN6-203ENST00000374610 TLE2Q04725 743 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 PPFIA1Q13136 1202 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 PTGISQ16647 500 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 ARL6IP4Q66PJ3 421 aaKnown RBP17.1■□□□□ 0.33
PFDN6-203ENST00000374610 TPH2Q8IWU9 490 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 CCDC43Q96MW1 224 aaKnown RBP17.1■□□□□ 0.33
PFDN6-203ENST00000374610 PCYT2Q99447 389 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 RNPEPQ9H4A4 650 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 LRWD1Q9UFC0 647 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 CFAP45Q9UL16 551 aa17.1■□□□□ 0.33
PFDN6-203ENST00000374610 IGKV6D-21A0A0A0MT36 114 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 HBP1O60381 514 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 CLTBP09497 229 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 QARSP47897 775 aaKnown RBP17.09■□□□□ 0.33
PFDN6-203ENST00000374610 CDK7P50613 346 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
PFDN6-203ENST00000374610 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 SNX17Q15036 470 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 HAUS3Q68CZ6 603 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 C4orf32Q8N8J7 132 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 NEK9Q8TD19 979 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 DYDC2Q96IM9 177 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 TOX2Q96NM4 488 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 EIF2AK1Q9BQI3 630 aaKnown RBP17.09■□□□□ 0.33
PFDN6-203ENST00000374610 TMEM39AQ9NV64 488 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
PFDN6-203ENST00000374610 SEPT9Q9UHD8 586 aaPredicted RBP17.09■□□□□ 0.33
PFDN6-203ENST00000374610 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 MAFBQ9Y5Q3 323 aaPredicted RBP17.09■□□□□ 0.33
PFDN6-203ENST00000374610 GRIN2DO15399 1336 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 NRCAMQ92823 1304 aa17.09■□□□□ 0.33
PFDN6-203ENST00000374610 RRN3P2A6NIE6 340 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 DDX11L8A8MPP1 907 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 B4GALT4O60513 344 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 OATP04181 439 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 PRKCEQ02156 737 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 CTTNQ14247 550 aaKnown RBP17.08■□□□□ 0.32
PFDN6-203ENST00000374610 PDIA5Q14554 519 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 ZRSR1Q15695 479 aaKnown RBP17.08■□□□□ 0.32
PFDN6-203ENST00000374610 GRIK4Q16099 956 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 KRT79Q5XKE5 535 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 ATL3Q6DD88 541 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 B3GNT9Q6UX72 402 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 ANKRD33Q7Z3H0 272 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 SLC43A3Q8NBI5 491 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 BBXQ8WY36 941 aaPredicted RBP17.08■□□□□ 0.32
PFDN6-203ENST00000374610 USP28Q96RU2 1077 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 LXNQ9BS40 222 aa17.08■□□□□ 0.32
PFDN6-203ENST00000374610 FTOQ9C0B1 505 aaKnown RBP eCLIP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms