RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 ATG7O95352 703 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 GNAT1P11488 350 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 SLC26A2P50443 739 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 SF3A1Q15459 793 aaKnown RBP17.13■□□□□ 0.33
PFDN6-202ENST00000374607 TRIM60Q495X7 471 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 NFRKBQ6P4R8 1299 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 PLPPR4Q7Z2D5 763 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 KAT2BQ92831 832 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 ATP6V0A1Q93050 837 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 MTMR9Q96QG7 549 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 ATP6V1DQ9Y5K8 247 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 EMSYQ7Z589 1322 aa17.13■□□□□ 0.33
PFDN6-202ENST00000374607 LGR5O75473 907 aa17.12■□□□□ 0.33
PFDN6-202ENST00000374607 NUCB2P80303 420 aa17.12■□□□□ 0.33
PFDN6-202ENST00000374607 PTPN11Q06124 597 aaPredicted RBP17.12■□□□□ 0.33
PFDN6-202ENST00000374607 PKP1Q13835 747 aa17.12■□□□□ 0.33
PFDN6-202ENST00000374607 CCDC60Q8IWA6 550 aaPredicted RBP17.12■□□□□ 0.33
PFDN6-202ENST00000374607 C7orf61Q8IZ16 206 aa17.12■□□□□ 0.33
PFDN6-202ENST00000374607 PPP1R13LQ8WUF5 828 aa17.12■□□□□ 0.33
PFDN6-202ENST00000374607 PRDM5Q9NQX1 630 aaPredicted RBP17.12■□□□□ 0.33
PFDN6-202ENST00000374607 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
PFDN6-202ENST00000374607 VAV3Q9UKW4 847 aa17.12■□□□□ 0.33
PFDN6-202ENST00000374607 POTEB3A0JP26 581 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 C17orf102A2RUQ5 167 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 SMIM10L2AP0DMW4 78 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 SMIM10L2BP0DMW5 78 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 NCLP19338 710 aaKnown RBP17.11■□□□□ 0.33
PFDN6-202ENST00000374607 PRPHP41219 470 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 STK38Q15208 465 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 EPHA7Q15375 998 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 C1orf53Q5VUE5 145 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 POTEBQ6S5H4 581 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 FAM167AQ96KS9 214 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 NRBP2Q9NSY0 501 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 HDAC6Q9UBN7 1215 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 NR2E3Q9Y5X4 410 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
PFDN6-202ENST00000374607 MKI67P46013 3256 aaKnown RBP17.11■□□□□ 0.33
PFDN6-202ENST00000374607 VWA3AA6NCI4 1184 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 POTEMA6NI47 508 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 HAS3O00219 553 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 EML1O00423 815 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 BRD1O95696 1058 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
PFDN6-202ENST00000374607 PSMC5P62195 406 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 IGBP1P78318 339 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 ATP2C1P98194 919 aaPredicted RBP17.1■□□□□ 0.33
PFDN6-202ENST00000374607 TLE2Q04725 743 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 PPFIA1Q13136 1202 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 PTGISQ16647 500 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 PRPF38BQ5VTL8 546 aaKnown RBP17.1■□□□□ 0.33
PFDN6-202ENST00000374607 ARL6IP4Q66PJ3 421 aaKnown RBP17.1■□□□□ 0.33
PFDN6-202ENST00000374607 TPH2Q8IWU9 490 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 CCDC43Q96MW1 224 aaKnown RBP17.1■□□□□ 0.33
PFDN6-202ENST00000374607 PCYT2Q99447 389 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 RNPEPQ9H4A4 650 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 LRWD1Q9UFC0 647 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 CFAP45Q9UL16 551 aa17.1■□□□□ 0.33
PFDN6-202ENST00000374607 IGKV6D-21A0A0A0MT36 114 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 HBP1O60381 514 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 CLTBP09497 229 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 QARSP47897 775 aaKnown RBP17.09■□□□□ 0.33
PFDN6-202ENST00000374607 CDK7P50613 346 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
PFDN6-202ENST00000374607 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 SNX17Q15036 470 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 HAUS3Q68CZ6 603 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 C4orf32Q8N8J7 132 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 NEK9Q8TD19 979 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 DYDC2Q96IM9 177 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 TOX2Q96NM4 488 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 EIF2AK1Q9BQI3 630 aaKnown RBP17.09■□□□□ 0.33
PFDN6-202ENST00000374607 TMEM39AQ9NV64 488 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
PFDN6-202ENST00000374607 SEPT9Q9UHD8 586 aaPredicted RBP17.09■□□□□ 0.33
PFDN6-202ENST00000374607 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 MAFBQ9Y5Q3 323 aaPredicted RBP17.09■□□□□ 0.33
PFDN6-202ENST00000374607 GRIN2DO15399 1336 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 NRCAMQ92823 1304 aa17.09■□□□□ 0.33
PFDN6-202ENST00000374607 RRN3P2A6NIE6 340 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 DDX11L8A8MPP1 907 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 B4GALT4O60513 344 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 OATP04181 439 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 PRKCEQ02156 737 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 CTTNQ14247 550 aaKnown RBP17.08■□□□□ 0.32
PFDN6-202ENST00000374607 PDIA5Q14554 519 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 ZRSR1Q15695 479 aaKnown RBP17.08■□□□□ 0.32
PFDN6-202ENST00000374607 GRIK4Q16099 956 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 KRT79Q5XKE5 535 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 ATL3Q6DD88 541 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 B3GNT9Q6UX72 402 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 ANKRD33Q7Z3H0 272 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 SLC43A3Q8NBI5 491 aa17.08■□□□□ 0.32
PFDN6-202ENST00000374607 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms