RNA–Protein interactions for RNA: ENST00000374215.5

UBXN11-203, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-203ENST00000374215 CNNM3Q8NE01 707 aa13.53□□□□□ -0.24
UBXN11-203ENST00000374215 PYM1Q9BRP8 204 aaKnown RBP13.53□□□□□ -0.24
UBXN11-203ENST00000374215 LXNQ9BS40 222 aa13.53□□□□□ -0.24
UBXN11-203ENST00000374215 MMTAG2Q9BU76 263 aaKnown RBP13.53□□□□□ -0.24
UBXN11-203ENST00000374215 CCSER1Q9C0I3 900 aa13.53□□□□□ -0.24
UBXN11-203ENST00000374215 AP5M1Q9H0R1 490 aa13.53□□□□□ -0.24
UBXN11-203ENST00000374215 GZF1Q9H116 711 aaPredicted RBP13.53□□□□□ -0.24
UBXN11-203ENST00000374215 NUP62CLQ9H1M0 184 aa13.53□□□□□ -0.24
UBXN11-203ENST00000374215 DDX19AQ9NUU7 478 aaKnown RBP13.53□□□□□ -0.24
UBXN11-203ENST00000374215 SERTAD1Q9UHV2 236 aa13.53□□□□□ -0.24
UBXN11-203ENST00000374215 KIAA1024Q9UPX6 916 aa13.53□□□□□ -0.24
UBXN11-203ENST00000374215 HPSEQ9Y251 543 aa13.53□□□□□ -0.24
UBXN11-203ENST00000374215 RBM47A0AV96 593 aaKnown RBP13.52□□□□□ -0.25
UBXN11-203ENST00000374215 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.25
UBXN11-203ENST00000374215 INHAP05111 366 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 CYBAP13498 195 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 AKR1A1P14550 325 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 CCND3P30281 292 aaPredicted RBP13.52□□□□□ -0.25
UBXN11-203ENST00000374215 GRK4P32298 578 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 CHMP4BP1P59074 171 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 ARHGAP1Q07960 439 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 CACNB2Q08289 660 aaPredicted RBP13.52□□□□□ -0.25
UBXN11-203ENST00000374215 GRB10Q13322 594 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 LAMC2Q13753 1193 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 UGCGQ16739 394 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 DUSP28Q4G0W2 176 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 SWSAP1Q6NVH7 229 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 TLK2Q86UE8 772 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 CKAP2LQ8IYA6 745 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 TRPV1Q8NER1 839 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 NEK9Q8TD19 979 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 SH3TC2Q8TF17 1288 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 AFG1LQ8WV93 481 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 PNMA5Q96PV4 448 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 NT5C3AQ9H0P0 336 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 AZI2Q9H6S1 392 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 TUFT1Q9NNX1 390 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 GABBR1Q9UBS5 961 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 PCDHA10Q9Y5I2 948 aa13.52□□□□□ -0.25
UBXN11-203ENST00000374215 NKRFO15226 690 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBXN11-203ENST00000374215 ADCY6O43306 1168 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 P4HBP07237 508 aaKnown RBP13.51□□□□□ -0.25
UBXN11-203ENST00000374215 TCF7P36402 384 aaPredicted RBP13.51□□□□□ -0.25
UBXN11-203ENST00000374215 AFMP43652 599 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 LONRF3Q496Y0 759 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 TMEM119Q4V9L6 283 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 HABP4Q5JVS0 413 aaKnown RBP13.51□□□□□ -0.25
UBXN11-203ENST00000374215 CCDC183Q5T5S1 534 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 FAM160B1Q5W0V3 765 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 KRBA2Q6ZNG9 492 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 CATSPER3Q86XQ3 398 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 GRAMD1CQ8IYS0 662 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 ENGASEQ8NFI3 743 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 RDM1Q8NG50 284 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 STAMQ92783 540 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 GLG1Q92896 1179 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 ATP6V0A1Q93050 837 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 CCDC34Q96HJ3 373 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 POLR3CQ9BUI4 534 aaPredicted RBP13.51□□□□□ -0.25
UBXN11-203ENST00000374215 TNMDQ9H2S6 317 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 CLSTN2Q9H4D0 955 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 ZNF302Q9NR11 478 aa13.51□□□□□ -0.25
UBXN11-203ENST00000374215 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 E9PMD0 336 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 ACTN4O43707 911 aaKnown RBP13.5□□□□□ -0.25
UBXN11-203ENST00000374215 ZNF286BP0CG31 522 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 SPATA31C1P0DKV0 1188 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 MARK3P27448 753 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 RPA1P27694 616 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 QARSP47897 775 aaKnown RBP13.5□□□□□ -0.25
UBXN11-203ENST00000374215 PSMC5P62195 406 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 PRKCEQ02156 737 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 SNW1Q13573 536 aaKnown RBP13.5□□□□□ -0.25
UBXN11-203ENST00000374215 MCM6Q14566 821 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 ECM1Q16610 540 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 HSDL1Q3SXM5 330 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 PDXDC2PQ6P474 469 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 B3GNT9Q6UX72 402 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 TRIM50Q86XT4 487 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 CCDC60Q8IWA6 550 aaPredicted RBP13.5□□□□□ -0.25
UBXN11-203ENST00000374215 PIGOQ8TEQ8 1089 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 SEPT1Q8WYJ6 367 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 RAD54LQ92698 747 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 GPR20Q99678 358 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 ZSWIM4Q9H7M6 989 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 STK17AQ9UEE5 414 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 SEPT9Q9UHD8 586 aaPredicted RBP13.5□□□□□ -0.25
UBXN11-203ENST00000374215 USP25Q9UHP3 1055 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 HOOK1Q9UJC3 728 aaKnown RBP13.5□□□□□ -0.25
UBXN11-203ENST00000374215 DNM3Q9UQ16 869 aa13.5□□□□□ -0.25
UBXN11-203ENST00000374215 GSTTP1A0A1W2PQM5 241 aa13.49□□□□□ -0.25
UBXN11-203ENST00000374215 ARHGEF35A5YM69 484 aa13.49□□□□□ -0.25
UBXN11-203ENST00000374215 SLC26A4O43511 780 aa13.49□□□□□ -0.25
UBXN11-203ENST00000374215 DKC1O60832 514 aaKnown RBP eCLIP13.49□□□□□ -0.25
UBXN11-203ENST00000374215 KRT18P05783 430 aaKnown RBP13.49□□□□□ -0.25
UBXN11-203ENST00000374215 MYL3P08590 195 aa13.49□□□□□ -0.25
UBXN11-203ENST00000374215 SLFN14P0C7P3 912 aa13.49□□□□□ -0.25
UBXN11-203ENST00000374215 RARBP10826 455 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms