RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 RIOK3O14730 519 aaKnown RBP13.94□□□□□ -0.18
PRPF4-202ENST00000374199 ZBED4O75132 1171 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 STAM2O75886 525 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 ETF1P62495 437 aaKnown RBP13.94□□□□□ -0.18
PRPF4-202ENST00000374199 VSIG10LQ86VR7 867 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 ATG4CQ96DT6 458 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 ST6GALNAC4Q9H4F1 302 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 RIPK3Q9Y572 518 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 DOCK5Q9H7D0 1870 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 ASTN1O14525 1302 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 B4DLN1 442 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 FLOT1O75955 427 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 KIF20AO95235 890 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 TMEM132BQ14DG7 1078 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 DYDC2Q96IM9 177 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 FHDC1Q9C0D6 1143 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-202ENST00000374199 UTRNP46939 3433 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 NFASCO94856 1347 aa13.94□□□□□ -0.18
PRPF4-202ENST00000374199 UQCRHLA0A096LP55 91 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
PRPF4-202ENST00000374199 SLC16A3O15427 465 aaKnown RBP13.93□□□□□ -0.18
PRPF4-202ENST00000374199 MAFGO15525 162 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 UQCRHP07919 91 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 MOGSQ13724 837 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 COG2Q14746 738 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 PPFIBP1Q86W92 1011 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 GPRASP2Q96D09 838 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 TRERF1Q96PN7 1200 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 NACC1Q96RE7 527 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 PICK1Q9NRD5 415 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 TBC1D22BQ9NU19 505 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 RGL1Q9NZL6 768 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 SOWAHDA6NJG2 315 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 GAS7O60861 476 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 STBD1O95210 358 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 YBX3P16989 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRPF4-202ENST00000374199 TAAR1Q96RJ0 339 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 NDST4Q9H3R1 872 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 MAGEC2Q9UBF1 373 aaPredicted RBP13.93□□□□□ -0.18
PRPF4-202ENST00000374199 REXO2Q9Y3B8 237 aaKnown RBP13.93□□□□□ -0.18
PRPF4-202ENST00000374199 COL4A3BPQ9Y5P4 624 aa13.93□□□□□ -0.18
PRPF4-202ENST00000374199 A0A0G2JLL6 359 aaPredicted RBP13.92□□□□□ -0.18
PRPF4-202ENST00000374199 RGS20O76081 388 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 ZBED6P86452 979 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 CYP26C1Q6V0L0 522 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 PRRT2Q7Z6L0 340 aaPredicted RBP13.92□□□□□ -0.18
PRPF4-202ENST00000374199 DAW1Q8N136 415 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 ZC3H15Q8WU90 426 aaKnown RBP13.92□□□□□ -0.18
PRPF4-202ENST00000374199 ANKRD7Q92527 254 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 BAP1Q92560 729 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 TIPINQ9BVW5 301 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 TANGO6Q9C0B7 1094 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 DMAC2Q9NW81 257 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 KCNH4Q9UQ05 1017 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 ARHGAP25P42331 645 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 KNOP1Q1ED39 458 aaKnown RBP13.92□□□□□ -0.18
PRPF4-202ENST00000374199 MRPL44Q9H9J2 332 aaKnown RBP13.92□□□□□ -0.18
PRPF4-202ENST00000374199 ZNF76P36508 570 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 KCNMA1Q12791 1236 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 PABPC4Q13310 644 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRPF4-202ENST00000374199 VGLL4Q14135 290 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 MYBPC2Q14324 1141 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 MTF1Q14872 753 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 FRMD5Q7Z6J6 570 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 OR8K1Q8NGG5 319 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 SYN2Q92777 582 aaPredicted RBP13.92□□□□□ -0.18
PRPF4-202ENST00000374199 TSG101Q99816 390 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 BHMT2Q9H2M3 363 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 CYP39A1Q9NYL5 469 aa13.92□□□□□ -0.18
PRPF4-202ENST00000374199 TGFB1I1O43294 461 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 MARCH6O60337 910 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 RNF207Q6ZRF8 634 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 SFR1Q86XK3 245 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 SLC9A9Q8IVB4 645 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 C4orf19Q8IY42 314 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
PRPF4-202ENST00000374199 FBXL5Q9UKA1 691 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 ZHX2Q9Y6X8 837 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 ZNF236Q9UL36 1845 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 NOL4O94818 638 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 P4HBP07237 508 aaKnown RBP13.91□□□□□ -0.18
PRPF4-202ENST00000374199 EDNRBP24530 442 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 ICAM3P32942 547 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 PURBQ96QR8 312 aaKnown RBP13.91□□□□□ -0.18
PRPF4-202ENST00000374199 LXNQ9BS40 222 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 NOC4LQ9BVI4 516 aaKnown RBP13.91□□□□□ -0.18
PRPF4-202ENST00000374199 TYW1Q9NV66 732 aaKnown RBP13.91□□□□□ -0.18
PRPF4-202ENST00000374199 FAM184BQ9ULE4 1060 aa13.91□□□□□ -0.18
PRPF4-202ENST00000374199 ATP8B3O60423 1300 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 UNCXA6NJT0 531 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 KCNA2P16389 499 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 MAP3K9P80192 1104 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 CTTNQ14247 550 aaKnown RBP13.9□□□□□ -0.18
PRPF4-202ENST00000374199 LRRC41Q15345 812 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 ASTE1Q2TB18 679 aaPredicted RBP13.9□□□□□ -0.18
PRPF4-202ENST00000374199 C12orf56Q8IXR9 622 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 TRMT1Q9NXH9 659 aaKnown RBP13.9□□□□□ -0.18
PRPF4-202ENST00000374199 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
PRPF4-202ENST00000374199 ZSWIM8A7E2V4 1837 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms