RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TRIM4Q9C037 500 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 ZCWPW1Q9H0M4 648 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 CNNM2Q9H8M5 875 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 TACC3Q9Y6A5 838 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 NUP188Q5SRE5 1749 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 MYH7BA7E2Y1 1941 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 RGPD3A6NKT7 1758 aaPredicted RBP14.09□□□□□ -0.15
PRPF4-201ENST00000374198 RGPD4Q7Z3J3 1758 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 CES2O00748 559 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 DAPK3O43293 454 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 SNX3O60493 162 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 PPFIA2O75334 1257 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 GNAZP19086 355 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 PCK1P35558 622 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 PKN1Q16512 942 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 PROCA1Q8NCQ7 364 aaPredicted RBP14.09□□□□□ -0.15
PRPF4-201ENST00000374198 TAF4BQ92750 862 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 MMRN2Q9H8L6 949 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 INTS9Q9NV88 658 aaKnown RBP14.09□□□□□ -0.15
PRPF4-201ENST00000374198 TMOD3Q9NYL9 352 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 LAMB4A4D0S4 1761 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 PRDM1O75626 825 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 OAS1P00973 400 aaKnown RBP14.08□□□□□ -0.16
PRPF4-201ENST00000374198 SHBGP04278 402 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 ITGA6P23229 1130 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 ASRGL1Q7L266 308 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 BAP1Q92560 729 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 BICD1Q96G01 975 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 KCNK3O14649 394 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 KLRC1P26715 233 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 RCAN1P53805 252 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 ALX1Q15699 326 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 LRRC23Q53EV4 343 aaPredicted RBP14.08□□□□□ -0.16
PRPF4-201ENST00000374198 CCDC178Q5BJE1 867 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 CMPK2Q5EBM0 449 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 ZNF654Q8IZM8 581 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 DCAF5Q96JK2 942 aa14.08□□□□□ -0.16
PRPF4-201ENST00000374198 USP15Q9Y4E8 981 aaPredicted RBP14.08□□□□□ -0.16
PRPF4-201ENST00000374198 PDHA1P08559 390 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 ATP6V1C1P21283 382 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 GBP1P32455 592 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 PLS1Q14651 629 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 VWA3BQ502W6 1294 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 NAALADL2Q58DX5 795 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 AKNAD1Q5T1N1 836 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 HGSNATQ68CP4 663 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 PIGBQ92521 554 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 DISC1Q9NRI5 854 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 STK32BQ9NY57 414 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 MCM7P33993 719 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 LONP1P36776 959 aaKnown RBP14.07□□□□□ -0.16
PRPF4-201ENST00000374198 PDE6CP51160 858 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 KCNQ4P56696 695 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 SPDYCQ5MJ68 293 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 PDXDC1Q6P996 788 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 CCDC84Q86UT8 332 aaPredicted RBP14.07□□□□□ -0.16
PRPF4-201ENST00000374198 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 ATL2Q8NHH9 583 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 ACTRT1Q8TDG2 376 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 ZNF526Q8TF50 670 aaPredicted RBP14.07□□□□□ -0.16
PRPF4-201ENST00000374198 PGM2Q96G03 612 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 LUC7LQ9NQ29 371 aaKnown RBP14.07□□□□□ -0.16
PRPF4-201ENST00000374198 NKX1-2Q9UD57 310 aaPredicted RBP14.07□□□□□ -0.16
PRPF4-201ENST00000374198 G3BP2Q9UN86 482 aaKnown RBP14.07□□□□□ -0.16
PRPF4-201ENST00000374198 CD2APQ9Y5K6 639 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 SLC4A4Q9Y6R1 1079 aa14.07□□□□□ -0.16
PRPF4-201ENST00000374198 E7ENQ6 273 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 MYL1P05976 194 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 IMPDH2P12268 514 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 USP4Q13107 963 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 UBE3CQ15386 1083 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 RPS6KA1Q15418 735 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 TDRD12Q587J7 1177 aaKnown RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 RRP12Q5JTH9 1297 aaKnown RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 HHATQ5VTY9 493 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 TMEM154Q6P9G4 183 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 MFSD6Q6ZSS7 791 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 APBB1IPQ7Z5R6 666 aaPredicted RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 PLBD2Q8NHP8 589 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 FBF1Q8TES7 1133 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 AP1M1Q9BXS5 423 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 DDX47Q9H0S4 455 aaKnown RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 C5P01031 1676 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 hCG_1642624A0A1W2PR95 340 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 KLC1Q07866 573 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 HLFQ16534 295 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 SDCCAG8Q86SQ7 713 aaPredicted RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 ZNF513Q8N8E2 541 aaPredicted RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 STRBPQ96SI9 672 aaKnown RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 PCMTD2Q9NV79 361 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 CCNL1Q9UK58 526 aaPredicted RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 ZMYND8Q9ULU4 1186 aaPredicted RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 TRIM33Q9UPN9 1127 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 ATP8A1Q9Y2Q0 1164 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 TOGARAM1Q9Y4F4 1720 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
PRPF4-201ENST00000374198 ZNF532Q9HCE3 1301 aa14.06□□□□□ -0.16
PRPF4-201ENST00000374198 CEP104O60308 925 aa14.05□□□□□ -0.16
PRPF4-201ENST00000374198 SP100P23497 879 aaPredicted RBP14.05□□□□□ -0.16
PRPF4-201ENST00000374198 CABP4P57796 275 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms