RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SUCLA2Q9P2R7 463 aaPredicted RBP15.47■□□□□ 0.07
TRAF1-201ENST00000373887 NOP14P78316 857 aaKnown RBP15.47■□□□□ 0.07
TRAF1-201ENST00000373887 FAM149B1Q96BN6 582 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 TBK1Q9UHD2 729 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 WDR91A4D1P6 747 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 CFLARO15519 480 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 GTPBP6O43824 516 aaPredicted RBP15.47■□□□□ 0.07
TRAF1-201ENST00000373887 EVI5O60447 810 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 CD58P19256 250 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 POLE2P56282 527 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 CYP4F22Q6NT55 531 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 CCNYQ8ND76 341 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 TMEM63CQ9P1W3 806 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 N4BP1O75113 896 aaKnown RBP15.47■□□□□ 0.07
TRAF1-201ENST00000373887 CPP00450 1065 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 SEPT2Q15019 361 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 IQCDQ96DY2 449 aa15.47■□□□□ 0.07
TRAF1-201ENST00000373887 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 LRRN2O75325 713 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 SYF2O95926 243 aaKnown RBP15.46■□□□□ 0.07
TRAF1-201ENST00000373887 C2orf54Q08AI8 447 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 TCP11X2Q5H9J9 407 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 SNRNP48Q6IEG0 339 aaKnown RBP15.46■□□□□ 0.07
TRAF1-201ENST00000373887 SPATS2Q86XZ4 545 aaKnown RBP15.46■□□□□ 0.07
TRAF1-201ENST00000373887 SPATA31E1Q6ZUB1 1445 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 SH2B2O14492 632 aaPredicted RBP15.46■□□□□ 0.07
TRAF1-201ENST00000373887 BNIP3LO60238 219 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 PSAPP07602 524 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 TTC30BQ8N4P2 665 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 FANCLQ9NW38 375 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 EFCAB8A8MWE9 144 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 NFIXQ14938 502 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 BBOF1Q8ND07 529 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 CLASP1Q7Z460 1538 aa15.46■□□□□ 0.07
TRAF1-201ENST00000373887 ABCB11O95342 1321 aa15.46■□□□□ 0.06
TRAF1-201ENST00000373887 NCF2P19878 526 aaPredicted RBP15.46■□□□□ 0.06
TRAF1-201ENST00000373887 NR2F2P24468 414 aa15.46■□□□□ 0.06
TRAF1-201ENST00000373887 ESRRGP62508 458 aa15.46■□□□□ 0.06
TRAF1-201ENST00000373887 H7C1W4 665 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 SLCO1A2P46721 670 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 MAGOHBQ96A72 148 aaKnown RBP15.45■□□□□ 0.06
TRAF1-201ENST00000373887 POLD4Q9HCU8 107 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 GOLGA8SH3BPF8 625 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 ANGPTL8Q6UXH0 198 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 H2AFZP0C0S5 128 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 SPP2Q13103 211 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 SLC27A3Q5K4L6 730 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 H2AFVQ71UI9 128 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 CNOT6LQ96LI5 555 aaKnown RBP15.45■□□□□ 0.06
TRAF1-201ENST00000373887 SRGAP2BP0DMP2 458 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 HABP4Q5JVS0 413 aaKnown RBP15.45■□□□□ 0.06
TRAF1-201ENST00000373887 PRAMEF18Q5VWM3 479 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 LRRC8AQ8IWT6 810 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 DNAAF3Q8N9W5 541 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 DRC3Q9H069 523 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 SPON1Q9HCB6 807 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 ASNSP08243 561 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 TCP1P17987 556 aaKnown RBP15.45■□□□□ 0.06
TRAF1-201ENST00000373887 TRIP13Q15645 432 aaPredicted RBP15.45■□□□□ 0.06
TRAF1-201ENST00000373887 FOXP4Q8IVH2 680 aaPredicted RBP15.45■□□□□ 0.06
TRAF1-201ENST00000373887 RNF26Q9BY78 433 aaPredicted RBP15.45■□□□□ 0.06
TRAF1-201ENST00000373887 ATP8A1Q9Y2Q0 1164 aa15.45■□□□□ 0.06
TRAF1-201ENST00000373887 BRD1O95696 1058 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 TMEM179Q6ZVK1 233 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 EXT2Q93063 718 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 ELP3Q9H9T3 547 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 POLR2BP30876 1174 aaKnown RBP15.44■□□□□ 0.06
TRAF1-201ENST00000373887 PPP2R5EQ16537 467 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 EXOC3L4Q17RC7 722 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 FBXO41Q8TF61 875 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 ACCSQ96QU6 501 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 IGKV5-2P06315 115 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 MSH2P43246 934 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 PIGOQ8TEQ8 1089 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRAF1-201ENST00000373887 OVOS2A0A0G2JMS6 1433 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 OVOS2A0A0J9YW53 1432 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 OVOS2Q6IE36 1432 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 CMA1P23946 247 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 KRT80Q6KB66 452 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 FAM160B2Q86V87 743 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 FBXL13Q8NEE6 735 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 CCDC124Q96CT7 223 aaKnown RBP15.44■□□□□ 0.06
TRAF1-201ENST00000373887 CPDO75976 1380 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 GOLGA8QA0A0J9YX86 632 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 PNMA6FA0A0J9YX94 578 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 GOLGA8OA6NCC3 632 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 GOLGA8NF8WBI6 632 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 THOC5Q13769 683 aaKnown RBP15.44■□□□□ 0.06
TRAF1-201ENST00000373887 SPOPLQ6IQ16 392 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 SLITRK6Q9H5Y7 841 aa15.44■□□□□ 0.06
TRAF1-201ENST00000373887 SPATS2LQ9NUQ6 558 aaKnown RBP15.44■□□□□ 0.06
TRAF1-201ENST00000373887 A2ML1A8K2U0 1454 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 CYP2E1P05181 493 aaPredicted RBP15.43■□□□□ 0.06
TRAF1-201ENST00000373887 ART3Q13508 389 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 MXD3Q9BW11 206 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 XPOTO43592 962 aaKnown RBP15.43■□□□□ 0.06
TRAF1-201ENST00000373887 TAF11Q15544 211 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 FBXO18Q8NFZ0 1043 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 NACC1Q96RE7 527 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms