RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 POTEIP0CG38 1075 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 MYBP10242 640 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 FAM153CQ494X1 144 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 POTEGQ6S5H5 508 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 POTEEQ6S8J3 1075 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 FRMD5Q7Z6J6 570 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 SP8Q8IXZ3 490 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 PIK3R5Q8WYR1 880 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14□□□□□ -0.17
CTPS1-202ENST00000372621 TRIM34Q9BYJ4 488 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 EHD4Q9H223 541 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 FAM153AQ9UHL3 310 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 NFU1Q9UMS0 254 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 PACSIN2Q9UNF0 486 aaPredicted RBP14□□□□□ -0.17
CTPS1-202ENST00000372621 EIF3HO15372 352 aaKnown RBP eCLIP14□□□□□ -0.17
CTPS1-202ENST00000372621 SPATA31C1P0DKV0 1188 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 NR2F2P24468 414 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 ARID5AQ03989 594 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 PTK2Q05397 1052 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 CDC37Q16543 378 aaPredicted RBP14□□□□□ -0.17
CTPS1-202ENST00000372621 DNAJC21Q5F1R6 531 aaKnown RBP14□□□□□ -0.17
CTPS1-202ENST00000372621 C10orf76Q5T2E6 689 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 MKL1Q969V6 931 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 EPB41L5Q9HCM4 733 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 HDAC9Q9UKV0 1011 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 NENFQ9UMX5 172 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 PCDHA1Q9Y5I3 950 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 SLURP2P0DP57 97 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 ZBTB48P10074 688 aaPredicted RBP14□□□□□ -0.17
CTPS1-202ENST00000372621 PSMC6P62333 389 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 DDR1Q08345 913 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 APOBEC3HQ6NTF7 200 aaKnown RBP14□□□□□ -0.17
CTPS1-202ENST00000372621 ZNF571Q7Z3V5 609 aaPredicted RBP14□□□□□ -0.17
CTPS1-202ENST00000372621 USP38Q8NB14 1042 aa14□□□□□ -0.17
CTPS1-202ENST00000372621 ANKRD31Q8N7Z5 1873 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 MPHOSPH10O00566 681 aaKnown RBP13.99□□□□□ -0.17
CTPS1-202ENST00000372621 RIMBP2O15034 1052 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 ACTN1P12814 892 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 SLC9A1P19634 815 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 GUCY2DQ02846 1103 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 AP3B2Q13367 1082 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 HHIPL2Q6UWX4 724 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
CTPS1-202ENST00000372621 CASKIN2Q8WXE0 1202 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 LENG9Q96B70 501 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 MXD3Q9BW11 206 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 ESYT3A0FGR9 886 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 UCHL3P15374 230 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 PAK2Q13177 524 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 KNOP1Q1ED39 458 aaKnown RBP13.99□□□□□ -0.17
CTPS1-202ENST00000372621 Q4G0T1 1027 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 CD302Q8IX05 232 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 CCDC17Q96LX7 622 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 KRT12Q99456 494 aa13.99□□□□□ -0.17
CTPS1-202ENST00000372621 ZNF233A6NK53 670 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 PPEF1O14829 653 aaPredicted RBP13.98□□□□□ -0.17
CTPS1-202ENST00000372621 TBX3O15119 743 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 PON1P27169 355 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 RPA1P27694 616 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 NFIAQ12857 509 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 EMC10Q5UCC4 262 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 LRRC57Q8N9N7 239 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 RBM46Q8TBY0 533 aaKnown RBP13.98□□□□□ -0.17
CTPS1-202ENST00000372621 DCAF4Q8WV16 495 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 BZW2Q9Y6E2 419 aaKnown RBP13.98□□□□□ -0.17
CTPS1-202ENST00000372621 NRXN2Q9P2S2 1712 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 ATP8B3O60423 1300 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 POLRMTO00411 1230 aaKnown RBP13.98□□□□□ -0.17
CTPS1-202ENST00000372621 HLA-DOAP06340 250 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 PRKCIP41743 596 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 EPS15P42566 896 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 ARHGAP4P98171 946 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 ZFPM1Q8IX07 1006 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 REEP2Q9BRK0 252 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 FBXL5Q9UKA1 691 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 BHMG1C9JSJ3 638 aaPredicted RBP13.98□□□□□ -0.17
CTPS1-202ENST00000372621 PDXKO00764 312 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 KRT14P02533 472 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 AFPP02771 609 aaKnown RBP13.98□□□□□ -0.17
CTPS1-202ENST00000372621 KRT18P05783 430 aaKnown RBP13.98□□□□□ -0.17
CTPS1-202ENST00000372621 SCNN1DP51172 638 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 DNA2P51530 1060 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 GNGT1P63211 74 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 TRADDQ15628 312 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 BMT2Q1RMZ1 405 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 CCDC43Q96MW1 224 aaKnown RBP13.98□□□□□ -0.17
CTPS1-202ENST00000372621 RUFY1Q96T51 708 aa13.98□□□□□ -0.17
CTPS1-202ENST00000372621 ARMCX3Q9UH62 379 aaPredicted RBP13.98□□□□□ -0.17
CTPS1-202ENST00000372621 RAD51CO43502 376 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 AKAP3O75969 853 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 EEF2P13639 858 aaKnown RBP13.97□□□□□ -0.17
CTPS1-202ENST00000372621 EPHA7Q15375 998 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 SHROOM1Q2M3G4 852 aaPredicted RBP13.97□□□□□ -0.17
CTPS1-202ENST00000372621 SFR1Q86XK3 245 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 SIAH1Q8IUQ4 282 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 EIF1ADQ8N9N8 165 aaKnown RBP13.97□□□□□ -0.17
CTPS1-202ENST00000372621 C1orf131Q8NDD1 294 aaKnown RBP13.97□□□□□ -0.17
CTPS1-202ENST00000372621 WHAMMQ8TF30 809 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 SCFD2Q8WU76 684 aa13.97□□□□□ -0.17
CTPS1-202ENST00000372621 IFT81Q8WYA0 676 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms