RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 HOXC10Q9NYD6 342 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 ZNF233A6NK53 670 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 HSPA1LP34931 641 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 SLC12A2P55011 1212 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 CUL1Q13616 776 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 DPP9Q86TI2 863 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 MRRFQ96E11 262 aaKnown RBP11.36□□□□□ -0.59
NUP188-201ENST00000372577 EEF2KMTQ96G04 330 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 FBXO2Q9UK22 296 aaPredicted RBP11.36□□□□□ -0.59
NUP188-201ENST00000372577 A6NJR5 290 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 SNAP23O00161 211 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 ECEL1O95672 775 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 PRCPP42785 496 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 PSMC4P43686 418 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 SCYL2Q6P3W7 929 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 DHX40Q8IX18 779 aaKnown RBP11.36□□□□□ -0.59
NUP188-201ENST00000372577 RNF10Q8N5U6 811 aaKnown RBP11.36□□□□□ -0.59
NUP188-201ENST00000372577 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 NACA2Q9H009 215 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 PDE11AQ9HCR9 933 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 SCINQ9Y6U3 715 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 MIF4GDA9UHW6 222 aaKnown RBP11.36□□□□□ -0.59
NUP188-201ENST00000372577 MOCS3O95396 460 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 ALKBH5Q6P6C2 394 aaKnown RBP11.36□□□□□ -0.59
NUP188-201ENST00000372577 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 SEPT14Q6ZU15 432 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 GDAP1L1Q96MZ0 367 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 NCAPGQ9BPX3 1015 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 NTSR2O95665 410 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 EIF3BP55884 814 aaKnown RBP11.35□□□□□ -0.59
NUP188-201ENST00000372577 COASYQ13057 564 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 CTTNQ14247 550 aaKnown RBP11.35□□□□□ -0.59
NUP188-201ENST00000372577 KIF28PB7ZC32 967 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 HOXA13P31271 388 aaPredicted RBP11.35□□□□□ -0.59
NUP188-201ENST00000372577 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 INO80B-WBP1J3KQ70 363 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 COPB2P35606 906 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 MTMR1Q13613 665 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 TXNRD1Q16881 649 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 CTAGE3PQ8IX95 158 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 ADGRF4Q8IZF3 695 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 CDKL2Q92772 493 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 RAB3IPQ96QF0 476 aaPredicted RBP11.35□□□□□ -0.59
NUP188-201ENST00000372577 INO80BQ9C086 356 aaPredicted RBP11.35□□□□□ -0.59
NUP188-201ENST00000372577 EPB41L5Q9HCM4 733 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 USP17L10C9JJH3 530 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 NMT2O60551 498 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 NR3C1P04150 777 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 APOBEC3FQ8IUX4 373 aaKnown RBP11.35□□□□□ -0.59
NUP188-201ENST00000372577 TIPINQ9BVW5 301 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 AP5M1Q9H0R1 490 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 PCIF1Q9H4Z3 704 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 CNOT10Q9H9A5 744 aaKnown RBP11.35□□□□□ -0.59
NUP188-201ENST00000372577 ATP6V0A4Q9HBG4 840 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 GARSP41250 739 aaKnown RBP11.35□□□□□ -0.59
NUP188-201ENST00000372577 ZNF131P52739 623 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 GEN1Q17RS7 908 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 KNOP1Q1ED39 458 aaKnown RBP11.35□□□□□ -0.59
NUP188-201ENST00000372577 SGO2Q562F6 1265 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 FAM83BQ5T0W9 1011 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 DNAJC24Q6P3W2 148 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 PPP4R1Q8TF05 950 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 RPS6KC1Q96S38 1066 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 AKT3Q9Y243 479 aa11.35□□□□□ -0.59
NUP188-201ENST00000372577 F5H6K3 240 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 ADGRB2O60241 1585 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 P4HBP07237 508 aaKnown RBP11.34□□□□□ -0.59
NUP188-201ENST00000372577 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
NUP188-201ENST00000372577 KLRC3Q07444 240 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 QRICH1Q2TAL8 776 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 MTERF2Q49AM1 385 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 LMNTD2Q8IXW0 634 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 PARD6BQ9BYG5 372 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 POTEMA6NI47 508 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 C21orf2O43822 256 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 MYO1EQ12965 1108 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 MAP7Q14244 749 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 GPR162Q16538 588 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 TSNAXIP1Q2TAA8 658 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 FBXO33Q7Z6M2 555 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 XXYLT1Q8NBI6 393 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 K7ERI5 159 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 LRRN2O75325 713 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 ARHGEF6Q15052 776 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 STXBP2Q15833 593 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 MIGA2Q7L4E1 593 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 SRBD1Q8N5C6 995 aaKnown RBP11.34□□□□□ -0.59
NUP188-201ENST00000372577 ANKRD42Q8N9B4 389 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 SLC44A5Q8NCS7 719 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 NSUN6Q8TEA1 469 aaKnown RBP11.34□□□□□ -0.59
NUP188-201ENST00000372577 TDRD3Q9H7E2 651 aaKnown RBP11.34□□□□□ -0.59
NUP188-201ENST00000372577 KDM6AO15550 1401 aaPredicted RBP11.34□□□□□ -0.59
NUP188-201ENST00000372577 TBX3O15119 743 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 STRIP1Q5VSL9 837 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 HHIPL2Q6UWX4 724 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 SFR1Q86XK3 245 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 PRPF38AQ8NAV1 312 aaKnown RBP11.34□□□□□ -0.59
NUP188-201ENST00000372577 TBC1D16Q8TBP0 767 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 BCAS4Q8TDM0 211 aa11.34□□□□□ -0.59
NUP188-201ENST00000372577 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms