RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 UTP11Q9Y3A2 253 aaKnown RBP13.09□□□□□ -0.31
SNX21-205ENST00000372547 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.31
SNX21-205ENST00000372547 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 PVALEFA0A1B0GWK0 134 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 CLGNO14967 610 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 TRIM37O94972 964 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 ATP6V1G2O95670 118 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 SHBGP04278 402 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 MMEP08473 750 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 CHN1P15882 459 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 SLCO1A2P46721 670 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 ELF3P78545 371 aaPredicted RBP13.08□□□□□ -0.32
SNX21-205ENST00000372547 COASYQ13057 564 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 ZNF571Q7Z3V5 609 aaPredicted RBP13.08□□□□□ -0.32
SNX21-205ENST00000372547 TMC3Q7Z5M5 1100 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 CCT6BQ92526 530 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 RAD54LQ92698 747 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 COA7Q96BR5 231 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 NUCKS1Q9H1E3 243 aaKnown RBP13.08□□□□□ -0.32
SNX21-205ENST00000372547 CD2APQ9Y5K6 639 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 F8W031 263 aaPredicted RBP13.08□□□□□ -0.32
SNX21-205ENST00000372547 DRD4P21917 467 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 GNA11P29992 359 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 SLC8A1P32418 973 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 TNNI2P48788 182 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 USP11P51784 963 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
SNX21-205ENST00000372547 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
SNX21-205ENST00000372547 TAX1BP1Q86VP1 789 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 DGKHQ86XP1 1220 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 CCDC63Q8NA47 563 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 SCFD2Q8WU76 684 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 XPO6Q96QU8 1125 aaKnown RBP13.08□□□□□ -0.32
SNX21-205ENST00000372547 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNX21-205ENST00000372547 ZMYND12Q9H0C1 365 aa13.08□□□□□ -0.32
SNX21-205ENST00000372547 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 CASZ1Q86V15 1759 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 SLIT2O94813 1529 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 EIF4E1BA6NMX2 242 aaKnown RBP13.07□□□□□ -0.32
SNX21-205ENST00000372547 FGGP02679 453 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 KRT18P05783 430 aaKnown RBP13.07□□□□□ -0.32
SNX21-205ENST00000372547 MYBP10242 640 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 ADAM9Q13443 819 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 ECM1Q16610 540 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 HERC4Q5GLZ8 1057 aaPredicted RBP13.07□□□□□ -0.32
SNX21-205ENST00000372547 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 ANKS4BQ8N8V4 417 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 DAGLBQ8NCG7 672 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 TMEM59LQ9UK28 342 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 NR2E1Q9Y466 385 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 NUP98P52948 1817 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 MYH1P12882 1939 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 MYH4Q9Y623 1939 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 FRMPD2Q68DX3 1309 aaPredicted RBP13.07□□□□□ -0.32
SNX21-205ENST00000372547 SPDYE3A6NKU9 549 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 F8VZ95 297 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 KCNH2Q12809 1159 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 TEX11Q8IYF3 940 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 CCDC26Q8TAB7 109 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 PBKQ96KB5 322 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 TACO1Q9BSH4 297 aaKnown RBP13.07□□□□□ -0.32
SNX21-205ENST00000372547 RIC8AQ9NPQ8 531 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 SWAP70Q9UH65 585 aa13.07□□□□□ -0.32
SNX21-205ENST00000372547 MYH7BA7E2Y1 1941 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 CCT8L1PA6NM43 557 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 E9PMD0 336 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 ABCB4P21439 1286 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 PLTPP55058 493 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 AGBL2Q5U5Z8 902 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 SPTY2D1Q68D10 685 aaPredicted RBP13.06□□□□□ -0.32
SNX21-205ENST00000372547 MAPKAPK5Q8IW41 473 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 C1orf131Q8NDD1 294 aaKnown RBP13.06□□□□□ -0.32
SNX21-205ENST00000372547 MGARPQ8TDB4 240 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 NSMCE1Q8WV22 266 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
SNX21-205ENST00000372547 RSRC1Q96IZ7 334 aaKnown RBP13.06□□□□□ -0.32
SNX21-205ENST00000372547 FMO2Q99518 471 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 EDEM3Q9BZQ6 932 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 MTFR1LQ9H019 292 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 STK17AQ9UEE5 414 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 MINPP1Q9UNW1 487 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 PEX19P40855 299 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 ZNF211Q13398 564 aaPredicted RBP13.06□□□□□ -0.32
SNX21-205ENST00000372547 XRCC4Q13426 336 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 DIXDC1Q155Q3 683 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 ERFEQ4G0M1 354 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 CCDC38Q502W7 563 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 GJB7Q6PEY0 223 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 LRRC34Q8IZ02 419 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 SH3RF3Q8TEJ3 882 aaPredicted RBP13.06□□□□□ -0.32
SNX21-205ENST00000372547 U2AF1L4Q8WU68 220 aaKnown RBP13.06□□□□□ -0.32
SNX21-205ENST00000372547 GLG1Q92896 1179 aa13.06□□□□□ -0.32
SNX21-205ENST00000372547 PRMT1Q99873 361 aaKnown RBP13.06□□□□□ -0.32
SNX21-205ENST00000372547 UBE4AQ14139 1066 aa13.05□□□□□ -0.32
SNX21-205ENST00000372547 NAIF1Q69YI7 327 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms