RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 KRT81Q14533 505 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 ZBTB41Q5SVQ8 909 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 GIMAP8Q8ND71 665 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 EPSTI1Q96J88 318 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 KIDINS220Q9ULH0 1771 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 MAN1A2O60476 641 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 PEX14O75381 377 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 SEC31AO94979 1220 aaKnown RBP14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 ZNF34Q8IZ26 560 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 HACL1Q9UJ83 578 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 RHOBTB1O94844 696 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 KIF23Q02241 960 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 CCDC89Q8N998 374 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 RILPQ96NA2 401 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 TMEM47Q9BQJ4 181 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 TMEM206Q9H813 350 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 STK17AQ9UEE5 414 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 TACC3Q9Y6A5 838 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 SPP2Q13103 211 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 SCYL2Q6P3W7 929 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 TTLL3Q9Y4R7 772 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 PLEKHA8P1O95397 391 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 MARK3P27448 753 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 PHBP35232 272 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 EZH2Q15910 746 aaKnown RBP14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 ZNF827Q17R98 1081 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 STRIP1Q5VSL9 837 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 TRIM68Q6AZZ1 485 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 POLR3EQ9NVU0 708 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 NEDD4P46934 1319 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 CNTNAP4Q9C0A0 1308 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 IKBKBO14920 756 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 BUB1O43683 1085 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 TRIM50Q86XT4 487 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 NUDCD3Q8IVD9 361 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 CNOT7Q9UIV1 285 aaKnown RBP14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 SCINQ9Y6U3 715 aa14.41□□□□□ -0.1
RAPGEF1-201ENST00000372189 FASTKD5Q7L8L6 764 aaKnown RBP14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 TECPR2O15040 1411 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 PSMC2P35998 433 aaKnown RBP14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 NR5A1Q13285 461 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 HADHQ16836 314 aaKnown RBP14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 STYK1Q6J9G0 422 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 SH3GL2Q99962 352 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 NCOA3Q9Y6Q9 1424 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 ARHGEF9O43307 516 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 OATP04181 439 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 FOSL2P15408 326 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 JAK3P52333 1124 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 SF3B3Q15393 1217 aaKnown RBP14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 DISC1Q9NRI5 854 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 TYW1Q9NV66 732 aaKnown RBP14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 HERC5Q9UII4 1024 aaKnown RBP14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 PCDHA6Q9UN73 950 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 PCDHA8Q9Y5H6 950 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 ABCB11O95342 1321 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 GNAT1P11488 350 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 KIF11P52732 1056 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 MFAP3P55082 362 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 SLC15A2Q16348 729 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 TBC1D10CQ8IV04 446 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 RMDN3Q96TC7 470 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 MMP19Q99542 508 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 FAN1Q9Y2M0 1017 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 COPB1P53618 953 aaKnown RBP14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 TMTC3Q6ZXV5 915 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 PPP1R16BQ96T49 567 aa14.4□□□□□ -0.1
RAPGEF1-201ENST00000372189 POLR2BP30876 1174 aaKnown RBP14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 POLR2FP61218 127 aaKnown RBP14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 DYNC1I2Q13409 638 aaKnown RBP14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 NECTIN1Q15223 517 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 GRAMD4Q6IC98 578 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 SLC35F6Q8N357 371 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 SLC16A10Q8TF71 515 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 RAB20Q9NX57 234 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 PREX1Q8TCU6 1659 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 IRX1P78414 480 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 CACNB1Q02641 598 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 KIAA1841Q6NSI8 718 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 CEP95Q96GE4 821 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 ITPK1Q13572 414 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 EXOC4Q96A65 974 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 CLTAP09496 248 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 ABCB4P21439 1286 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 PTPREP23469 700 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 MTMR1Q13613 665 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 SLFNL1Q499Z3 407 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 ZBTB33Q86T24 672 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 NT5C1BQ96P26 610 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 GSDMAQ96QA5 445 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 DPH5Q9H2P9 285 aa14.39□□□□□ -0.11
RAPGEF1-201ENST00000372189 A0A087WUV0 522 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 FAM170AA1A519 330 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 EPHB4P54760 987 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 SLC44A5Q8NCS7 719 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 KRT12Q99456 494 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 PCDHB4Q9Y5E5 795 aa14.38□□□□□ -0.11
RAPGEF1-201ENST00000372189 BCORL1Q5H9F3 1711 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms