RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 NHEJ1Q9H9Q4 299 aaPredicted RBP16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 M0R3G1 203 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 RUNX1T1Q06455 604 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 NSUN2Q08J23 767 aaKnown RBP eCLIP16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 PRPF18Q99633 342 aaKnown RBP16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 LSG1Q9H089 658 aaKnown RBP16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 RSPH10B2B2RC85 870 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 LRRN2O75325 713 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 RSPH10BP0C881 870 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 MTERF3Q96E29 417 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 NARS2Q96I59 477 aaKnown RBP16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 RMI1Q9H9A7 625 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 DNALI1O14645 258 aaPredicted RBP16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 KLHL18O94889 574 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 KRT1P04264 644 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 TECP42680 631 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 FGD2Q7Z6J4 655 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 REXO1Q8N1G1 1221 aaKnown RBP16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 DDHD1Q8NEL9 900 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 AZI2Q9H6S1 392 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 RFC4P35249 363 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 PSMC6P62333 389 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 DAB2IPQ5VWQ8 1189 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 KRT25Q7Z3Z0 450 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 UBE4BO95155 1302 aa16.4■□□□□ 0.22
GTF3C4-201ENST00000372146 HIC1Q14526 733 aa16.39■□□□□ 0.22
GTF3C4-201ENST00000372146 PTPN21Q16825 1174 aa16.39■□□□□ 0.22
GTF3C4-201ENST00000372146 TAF1BQ53T94 588 aaPredicted RBP16.39■□□□□ 0.22
GTF3C4-201ENST00000372146 SPATA1Q5VX52 437 aa16.39■□□□□ 0.22
GTF3C4-201ENST00000372146 SUPT20HQ8NEM7 779 aa16.39■□□□□ 0.22
GTF3C4-201ENST00000372146 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.39■□□□□ 0.22
GTF3C4-201ENST00000372146 ATAD3BQ5T9A4 648 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 LONP2Q86WA8 852 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 GPR101Q96P66 508 aaPredicted RBP16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 SLC39A2Q9NP94 309 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 GINM1Q9NU53 330 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 HAUS5O94927 633 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 C4BPBP20851 252 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 LIG4P49917 911 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 IMPG1Q17R60 797 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 SIX6OS1Q8N1H7 587 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 CFAP69A5D8W1 941 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 TOM1O60784 492 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 S100A9P06702 114 aaKnown RBP16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 ELMSAN1Q6PJG2 1045 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 PPP1R36Q96LQ0 422 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 DCTPP1Q9H773 170 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 MID2Q9UJV3 735 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 TBC1D10BQ4KMP7 808 aaPredicted RBP16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 TUBGCP2Q9BSJ2 902 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 GOLGA8MH3BSY2 632 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 TCF3P15923 654 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 COPS2P61201 443 aa16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 PRMT1Q99873 361 aaKnown RBP16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 UBTFL6P0CB48 400 aaPredicted RBP16.39■□□□□ 0.21
GTF3C4-201ENST00000372146 MRPS25P82663 173 aaKnown RBP16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 STX3Q13277 289 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 GSPT2Q8IYD1 628 aaKnown RBP16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 INPP5DQ92835 1189 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 GCNT4Q9P109 453 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 NCOA1Q15788 1441 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 TMCC1O94876 653 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 PGM1P36871 562 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 HADHAP40939 763 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 PRAMEP78395 509 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 DRP2Q13474 957 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 CLK1P49759 484 aaKnown RBP16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 MRPL50Q8N5N7 158 aaKnown RBP16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 ARL8AQ96BM9 186 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 MPP6Q9NZW5 540 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 TRIM66O15016 1216 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 BTKQ06187 659 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 ARHGAP17Q68EM7 881 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 RETREG2Q8NC44 543 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 XPO1O14980 1071 aaKnown RBP16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 ZBTB24O43167 697 aaPredicted RBP16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 LPXNO60711 386 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 ADAM9Q13443 819 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 TRIP4Q15650 581 aaPredicted RBP16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 TRIM11Q96F44 468 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 CCT7Q99832 543 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 TOMM70O94826 608 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 RPS6P62753 249 aaKnown RBP16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 MDH1BQ5I0G3 518 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 TEX13AQ9BXU3 409 aaPredicted RBP16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 CALN1Q9BXU9 219 aa16.38■□□□□ 0.21
GTF3C4-201ENST00000372146 SPOUT1Q5T280 376 aaKnown RBP16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 KHDRBS2Q5VWX1 349 aaKnown RBP16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 TRIM39Q9HCM9 518 aa16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 DLGAP2Q9P1A6 1054 aa16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 MYH11P35749 1972 aa16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 KRT40Q6A162 431 aa16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 DHX38Q92620 1227 aaKnown RBP16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 PCDHA13Q9Y5I0 950 aa16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 GAS7O60861 476 aa16.37■□□□□ 0.21
GTF3C4-201ENST00000372146 LMBR1LQ6UX01 489 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms