RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 MAPK4P31152 587 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 EHHADHQ08426 723 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 KRT71Q3SY84 523 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 TAB3Q8N5C8 712 aaPredicted RBP15.99■□□□□ 0.15
NDC1-201ENST00000371429 CCDC68Q9H2F9 335 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 TMEM260Q9NX78 707 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 ZNF70Q9UC06 446 aaPredicted RBP15.99■□□□□ 0.15
NDC1-201ENST00000371429 TECPR2O15040 1411 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
NDC1-201ENST00000371429 ZNF157P51786 506 aaPredicted RBP15.99■□□□□ 0.15
NDC1-201ENST00000371429 LRRC63Q05C16 580 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 SWSAP1Q6NVH7 229 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 RAET1EQ8TD07 263 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 HEXIM2Q96MH2 286 aaKnown RBP15.99■□□□□ 0.15
NDC1-201ENST00000371429 PSMD14O00487 310 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 WHAMMP3Q1A5X7 153 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 OR6B2Q6IFH4 312 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 HHIPL2Q6UWX4 724 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 BARHL2Q9NY43 387 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 GABBR1Q9UBS5 961 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 E9PCH4 1651 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 IPO5O00410 1097 aaKnown RBP15.98■□□□□ 0.15
NDC1-201ENST00000371429 IGSF3O75054 1194 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 GFPT2O94808 682 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 PLCB4Q15147 1175 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 DNAJC24Q6P3W2 148 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 SPATA33Q96N06 139 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 CPSF3Q9UKF6 684 aaKnown RBP15.98■□□□□ 0.15
NDC1-201ENST00000371429 IQSEC2Q5JU85 1478 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 DENND3A2RUS2 1198 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 P4HBP07237 508 aaKnown RBP15.98■□□□□ 0.15
NDC1-201ENST00000371429 QARSP47897 775 aaKnown RBP15.98■□□□□ 0.15
NDC1-201ENST00000371429 NEK9Q8TD19 979 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 RNF139Q8WU17 664 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 A0A087WWV3 80 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 ELF2Q15723 593 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 OR6B3Q8NGW1 331 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 ENOX1Q8TC92 643 aaKnown RBP15.98■□□□□ 0.15
NDC1-201ENST00000371429 DLC1Q96QB1 1528 aa15.98■□□□□ 0.15
NDC1-201ENST00000371429 FLT1P17948 1338 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 CALRP27797 417 aaKnown RBP15.97■□□□□ 0.15
NDC1-201ENST00000371429 ERCC6LQ2NKX8 1250 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 ZNF667Q5HYK9 610 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 RFX6Q8HWS3 928 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 DYDC2Q96IM9 177 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 PHBP35232 272 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 TTBK2Q6IQ55 1244 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 RYBPQ8N488 228 aaPredicted RBP15.97■□□□□ 0.15
NDC1-201ENST00000371429 SLITRK6Q9H5Y7 841 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 I3L4J1 428 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 NAA35Q5VZE5 725 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 CDC42EP5Q6NZY7 148 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 GCNAQ96QF7 691 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 MRPL47Q9HD33 250 aaKnown RBP15.97■□□□□ 0.15
NDC1-201ENST00000371429 ZBBXA8MT70 800 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 C19orf81C9J6K1 198 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 FAM133AQ8N9E0 248 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 MXD3Q9BW11 206 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 TEX13BQ9BXU2 312 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 LAMC1P11047 1609 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 PHLPP2Q6ZVD8 1323 aa15.97■□□□□ 0.15
NDC1-201ENST00000371429 ARL4AP40617 200 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 TNFAIP2Q03169 654 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 ZNF280CQ8ND82 737 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 TDRD7Q8NHU6 1098 aaKnown RBP15.96■□□□□ 0.15
NDC1-201ENST00000371429 OXER1Q8TDS5 423 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 LPAR1Q92633 364 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 THAP9Q9H5L6 903 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 GPBP1L1Q9HC44 474 aaPredicted RBP15.96■□□□□ 0.15
NDC1-201ENST00000371429 CDC27P30260 824 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 ZNF568Q3ZCX4 644 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 C11orf57Q6ZUT1 292 aaPredicted RBP15.96■□□□□ 0.15
NDC1-201ENST00000371429 UNC13DQ70J99 1090 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 LRRC8AQ8IWT6 810 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 AFAP1L1Q8TED9 768 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 FAM151AQ8WW52 585 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 DDX23Q9BUQ8 820 aaKnown RBP15.96■□□□□ 0.15
NDC1-201ENST00000371429 DPH5Q9H2P9 285 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 SAMSN1Q9NSI8 373 aaKnown RBP15.96■□□□□ 0.15
NDC1-201ENST00000371429 KCNH4Q9UQ05 1017 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 E9PMD0 336 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 SNAPC2Q13487 334 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 PRPSAP1Q14558 356 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 PRAMEF18Q5VWM3 479 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 CCNYQ8ND76 341 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 MTMR4Q9NYA4 1195 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 POLIQ9UNA4 740 aa15.96■□□□□ 0.15
NDC1-201ENST00000371429 PPRC1Q5VV67 1664 aaKnown RBP15.96■□□□□ 0.15
NDC1-201ENST00000371429 RHPN2Q8IUC4 686 aa15.96■□□□□ 0.14
NDC1-201ENST00000371429 NDST4Q9H3R1 872 aa15.96■□□□□ 0.14
NDC1-201ENST00000371429 PLCB1Q9NQ66 1216 aa15.96■□□□□ 0.14
NDC1-201ENST00000371429 MAD1L1Q9Y6D9 718 aa15.96■□□□□ 0.14
NDC1-201ENST00000371429 WDR46O15213 610 aaKnown RBP15.95■□□□□ 0.14
NDC1-201ENST00000371429 GUCY2FP51841 1108 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 ETF1P62495 437 aaKnown RBP15.95■□□□□ 0.14
NDC1-201ENST00000371429 SFR1Q86XK3 245 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 MTRQ99707 1265 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 CAPN12Q6ZSI9 719 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms