RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 IL17RAQ96F46 866 aa12.72□□□□□ -0.37
EXOSC1-204ENST00000370902 LMAN2LQ9H0V9 348 aa12.72□□□□□ -0.37
EXOSC1-204ENST00000370902 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
EXOSC1-204ENST00000370902 PRKAG3Q9UGI9 489 aa12.72□□□□□ -0.37
EXOSC1-204ENST00000370902 TUBE1Q9UJT0 475 aa12.72□□□□□ -0.37
EXOSC1-204ENST00000370902 CDY2AQ9Y6F7 541 aa12.72□□□□□ -0.37
EXOSC1-204ENST00000370902 SH2B2O14492 632 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 RB1P06400 928 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 RXRAP19793 462 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 MARK3P27448 753 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 SMARCA1P28370 1054 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 SSTR3P32745 418 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 TAF2Q6P1X5 1199 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 TSHZ1Q6ZSZ6 1077 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 CATIPQ7Z7H3 387 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 ADGRD2Q7Z7M1 963 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 RALYLQ86SE5 291 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 FIBCD1Q8N539 461 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 DNAJB3Q8WWF6 145 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 MSLNLQ96KJ4 702 aa12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 RBM8AQ9Y5S9 174 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 MRPL42Q9Y6G3 142 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-204ENST00000370902 hCG_1642624A0A1W2PR95 340 aa12.7□□□□□ -0.38
EXOSC1-204ENST00000370902 GLP2RO95838 553 aa12.7□□□□□ -0.38
EXOSC1-204ENST00000370902 CD52P31358 61 aa12.7□□□□□ -0.38
EXOSC1-204ENST00000370902 CLUL1Q15846 466 aa12.7□□□□□ -0.38
EXOSC1-204ENST00000370902 HFE2Q6ZVN8 426 aa12.7□□□□□ -0.38
EXOSC1-204ENST00000370902 RRP36Q96EU6 259 aaKnown RBP12.7□□□□□ -0.38
EXOSC1-204ENST00000370902 C11orf84Q9BUA3 381 aaPredicted RBP12.7□□□□□ -0.38
EXOSC1-204ENST00000370902 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 IGSF9BQ9UPX0 1349 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 ERICH2A1L162 156 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 PRC1O43663 620 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 ITGB1P05556 798 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 ALADP13716 330 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 GATMP50440 423 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 MRPS6P82932 125 aaKnown RBP12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 NHLH1Q02575 133 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 NLRX1Q86UT6 975 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 RAB11FIP4Q86YS3 637 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 CYP2W1Q8TAV3 490 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 TRAPPC12Q8WVT3 735 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 SEPT1Q8WYJ6 367 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 LSG1Q9H089 658 aaKnown RBP12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 TMX1Q9H3N1 280 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 ALG13Q9NP73 1137 aaKnown RBP12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 JADE2Q9NQC1 790 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 ERAP1Q9NZ08 941 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 PKD2L1Q9P0L9 805 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 CLEC1BQ9P126 229 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 PLAGL2Q9UPG8 496 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 PCDHGC5Q9Y5F6 944 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 EVPLQ92817 2033 aa12.69□□□□□ -0.38
EXOSC1-204ENST00000370902 MGEA5O60502 916 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 CSPG5O95196 566 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 EYA4O95677 639 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 INSRRP14616 1297 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 FUT2Q10981 343 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 ITGB3BPQ13352 177 aaPredicted RBP12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 ADAM15Q13444 863 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 SMAD4Q13485 552 aaKnown RBP12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 MTMR1Q13613 665 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 SART3Q15020 963 aaKnown RBP12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 PLCB4Q15147 1175 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 HERC4Q5GLZ8 1057 aaPredicted RBP12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 TMTC3Q6ZXV5 915 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 ALYREFQ86V81 257 aaKnown RBP12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 CMTR2Q8IYT2 770 aaKnown RBP12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 GIMAP8Q8ND71 665 aaPredicted RBP12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 SPPL3Q8TCT6 385 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 P2RX5Q93086 422 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 FBXL18Q96ME1 805 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 HCSTQ9UBK5 93 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 MUTYHQ9UIF7 546 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 RWDD3Q9Y3V2 267 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 CFAP54Q96N23 3096 aa12.68□□□□□ -0.38
EXOSC1-204ENST00000370902 KDM3AQ9Y4C1 1321 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 IGBP1P78318 339 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 TMEM62Q0P6H9 643 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 BTG3Q14201 252 aaPredicted RBP12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 WWC2Q6AWC2 1192 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 NPAS4Q8IUM7 802 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 SMRP1Q8NCR6 262 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 TMEM40Q8WWA1 233 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 RUFY2Q8WXA3 655 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 CUL5Q93034 780 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 CDHR1Q96JP9 859 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 FAM49AQ9H0Q0 323 aaPredicted RBP12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 SMARCAD1Q9H4L7 1026 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 PADI3Q9ULW8 664 aa12.67□□□□□ -0.38
EXOSC1-204ENST00000370902 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms