RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 AIFM3Q96NN9 605 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 JPH1Q9HDC5 661 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 VPS54Q9P1Q0 977 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 SLC9A2Q9UBY0 812 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 NFASCO94856 1347 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 IGKV6D-21A0A0A0MT36 114 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 CCDC196A0A1B0GTZ2 297 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 ABHD14A-ACY1A0A1B0GW23 586 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 MBLAC1A4D2B0 266 aaPredicted RBP12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 DDX39AO00148 427 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 PARNO95453 639 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 CYP3A4P08684 503 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 INSRRP14616 1297 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 ATP4AP20648 1035 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 IGFBP4P22692 258 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 PSMA5P28066 241 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 PPFIA1Q13136 1202 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 PLCB4Q15147 1175 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 NPY5RQ15761 445 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 GRIK4Q16099 956 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 GLG1Q92896 1179 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 LENG9Q96B70 501 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 GAS2L1Q99501 681 aaPredicted RBP12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 TM6SF1Q9BZW5 370 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 ERAP1Q9NZ08 941 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 COL4A4P53420 1690 aaPredicted RBP12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 EMSYQ7Z589 1322 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 NRCAMQ92823 1304 aa12.53□□□□□ -0.4
EXOSC1-202ENST00000370885 TLL1O43897 1013 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 GJB5O95377 273 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 KCNJ6P48051 423 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 IGBP1P78318 339 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 STK3Q13188 491 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 IKBKEQ14164 716 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 ABHD15Q6UXT9 468 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 NIPA1Q7RTP0 329 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 PLA2G4DQ86XP0 818 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 TEX2Q8IWB9 1127 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 DNAJB3Q8WWF6 145 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 ARNTL2Q8WYA1 636 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 SMARCAD1Q9H4L7 1026 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 EHMT1Q9H9B1 1298 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 CYP46A1Q9Y6A2 500 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 MTCH2Q9Y6C9 303 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 LOXHD1Q8IVV2 1947 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 TTC28Q96AY4 2481 aa12.52□□□□□ -0.41
EXOSC1-202ENST00000370885 WDR81Q562E7 1941 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 LINC01553A4QN01 128 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 ZBTB42B2RXF5 422 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 M0R2N6 131 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 SEC24BO95487 1268 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 GNAT1P11488 350 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 LPIN1Q14693 890 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 RPAINQ86UA6 219 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 CCDC60Q8IWA6 550 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 REXO1Q8N1G1 1221 aaKnown RBP12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 GJA10Q969M2 543 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 ZNF274Q96GC6 653 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 AGO3Q9H9G7 860 aaKnown RBP12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 C6orf50Q9HD87 102 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 TUBE1Q9UJT0 475 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 COL4A6Q14031 1691 aa12.51□□□□□ -0.41
EXOSC1-202ENST00000370885 CAND2O75155 1236 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 GHRP10912 638 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 CIITAP33076 1130 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 ZNF76P36508 570 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 STAT5BP51692 787 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 HTRA4P83105 476 aaPredicted RBP12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 SCRN1Q12765 414 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 GRB10Q13322 594 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 PLPPR4Q7Z2D5 763 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 MYOCDQ8IZQ8 938 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 LINC01599Q8WXQ3 324 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 RAD9AQ99638 391 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 SDF4Q9BRK5 362 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 ANP32EQ9BTT0 268 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 GLT8D2Q9H1C3 349 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 PDRG1Q9NUG6 133 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 TPCN1Q9ULQ1 816 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 CDY2AQ9Y6F7 541 aa12.5□□□□□ -0.41
EXOSC1-202ENST00000370885 KIF28PB7ZC32 967 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 IPO5O00410 1097 aaKnown RBP12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 MSH4O15457 936 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 POU3F3P20264 500 aaPredicted RBP12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 TMEM62Q0P6H9 643 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 PRR16Q569H4 304 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 FBXO47Q5MNV8 452 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 RTN4RL1Q86UN2 441 aaPredicted RBP12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 GDPD5Q8WTR4 605 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 SEPT8Q92599 483 aa12.49□□□□□ -0.41
EXOSC1-202ENST00000370885 TOP1MTQ969P6 601 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms