RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 hCG_1984214I3L0E3 225 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 INPPL1O15357 1258 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PRPF3O43395 683 aaKnown RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PPFIA4O75335 1185 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 FAM163BP0C2L3 166 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 STK3Q13188 491 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PTPN14Q15678 1187 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 MFSD6Q6ZSS7 791 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 ZNF713Q8N859 430 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 OSBPL7Q9BZF2 842 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 RNF41Q9H4P4 317 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 RIC8AQ9NPQ8 531 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PDGFCQ9NRA1 345 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 MOXD2PA6NHM9 499 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 ZNF213O14771 459 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 STAM2O75886 525 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 SREBF1P36956 1147 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 CCZ1BP86790 482 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 CCZ1P86791 482 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 DHX8Q14562 1220 aaKnown RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 WWC2Q6AWC2 1192 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 LRRC8AQ8IWT6 810 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 CRACR2BQ8N4Y2 399 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 CACTINQ8WUQ7 758 aaKnown RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 ESR2Q92731 530 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 ACAD9Q9H845 621 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 TMOD4Q9NZQ9 345 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 PNMA2Q9UL42 364 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 WDFY4Q6ZS81 3184 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 NRDCO43847 1150 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 PFKFB2O60825 505 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 GADD45BO75293 160 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 ACVR2BQ13705 512 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 TARBP2Q15633 366 aaKnown RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 TPD52L1Q16890 204 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 IQSEC1Q6DN90 963 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 TSHZ1Q6ZSZ6 1077 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 SPICE1Q8N0Z3 855 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 KLHL23Q8NBE8 558 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 BICD2Q8TD16 824 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 KCNMB3Q9NPA1 279 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 CYP46A1Q9Y6A2 500 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 BAZ2BQ9UIF8 2168 aaKnown RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 TRIP11Q15643 1979 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 MSCO60682 206 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 SHOX2O60902 331 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 IFNAR1P17181 557 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 RPS6P62753 249 aaKnown RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 XRRA1Q6P2D8 792 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 MOXD1Q6UVY6 613 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 ZNF654Q8IZM8 581 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 PPTC7Q8NI37 304 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 PDCD2LQ9BRP1 358 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 RAVER2Q9HCJ3 691 aaKnown RBP7.69□□□□□ -1.18
CSDE1-204ENST00000369530 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.69□□□□□ -1.181e-6■■■■■ 139.3
CSDE1-204ENST00000369530 FBXO40Q9UH90 709 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 SMC3Q9UQE7 1217 aa7.69□□□□□ -1.18
CSDE1-204ENST00000369530 VPS37CA5D8V6 355 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 MPHOSPH10O00566 681 aaKnown RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 FARP2O94887 1054 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 PGK2P07205 417 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 SCP2P22307 547 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 FOSBP53539 338 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 PPP2R5BQ15173 497 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 PDCD2Q16342 344 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 CDC37Q16543 378 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 SLC4A8Q2Y0W8 1093 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 Q4G0T1 1027 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 EARS2Q5JPH6 523 aaKnown RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 LRRC31Q6UY01 552 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 AMOTL1Q8IY63 956 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 DRAXINQ8NBI3 349 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 GPKOWQ92917 476 aaPredicted RBP eCLIP7.68□□□□□ -1.181e-7■□□□□ 10.5
CSDE1-204ENST00000369530 FAM212AQ96EL1 285 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 NACAP1Q9BZK3 213 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 ABHD16BQ9H3Z7 469 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 EHMT1Q9H9B1 1298 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 ZNF287Q9HBT7 754 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 PDRG1Q9NUG6 133 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 VAV3Q9UKW4 847 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 MUC22E2RYF6 1773 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 TSPY3P0CV98 308 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 TSPY8P0CW00 308 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 MYSM1Q5VVJ2 828 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 SNRNP48Q6IEG0 339 aaKnown RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 RSRC2Q7L4I2 434 aaKnown RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 MMP19Q99542 508 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 TPCN1Q9ULQ1 816 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 TNRC6BQ9UPQ9 1833 aaKnown RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 MEIS1O00470 390 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 LRMPQ12912 555 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 ITGB3BPQ13352 177 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 ERCC6LQ2NKX8 1250 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 BLOC1S2Q6QNY1 142 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 CCDC83Q8IWF9 413 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 GPR161Q8N6U8 529 aaKnown RBP7.68□□□□□ -1.18
CSDE1-204ENST00000369530 LZTS2Q9BRK4 669 aa7.68□□□□□ -1.18
CSDE1-204ENST00000369530 PAGR1Q9BTK6 254 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms