RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 SPAG5Q96R06 1193 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 EHD4Q9H223 541 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 PPARDQ03181 441 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 KIAA0753Q2KHM9 967 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 TBC1D10BQ4KMP7 808 aaPredicted RBP12.67□□□□□ -0.38
RAB39B-201ENST00000369454 COBLL1Q53SF7 1204 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 SLFN12Q8IYM2 578 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 ERMNQ8TAM6 284 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 ETNPPLQ8TBG4 499 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 SH2D3AQ9BRG2 576 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 HDAC9Q9UKV0 1011 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 PRR12Q9ULL5 1215 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 KLRC1P26715 233 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 ZC2HC1CQ53FD0 456 aaPredicted RBP12.67□□□□□ -0.38
RAB39B-201ENST00000369454 KCTD10Q9H3F6 313 aa12.67□□□□□ -0.38
RAB39B-201ENST00000369454 TBCAO75347 108 aaKnown RBP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 PALMO75781 387 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 SPIRE1Q08AE8 756 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 TRIM59Q8IWR1 403 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 RDH13Q8NBN7 331 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 PROCA1Q8NCQ7 364 aaPredicted RBP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 LENG9Q96B70 501 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 ARMCX3Q9UH62 379 aaPredicted RBP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 ESYT3A0FGR9 886 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 CCDC66A2RUB6 948 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 OPLAHO14841 1288 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 CAPN2P17655 700 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 NMT1P30419 496 aaKnown RBP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 SPATA4Q8NEY3 305 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 MKL1Q969V6 931 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 NOX5Q96PH1 765 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 PURBQ96QR8 312 aaKnown RBP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 EIF2AK1Q9BQI3 630 aaKnown RBP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 FBXO28Q9NVF7 368 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 CEP72Q9P209 647 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 HNRNPH3P31942 346 aaKnown RBP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 NOP2P46087 812 aaKnown RBP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 CDK17Q00537 523 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 SND1Q7KZF4 910 aaKnown RBP eCLIP12.66□□□□□ -0.38
RAB39B-201ENST00000369454 MYCT1Q8N699 235 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 RABEP2Q9H5N1 569 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 RABGAP1Q9Y3P9 1069 aa12.66□□□□□ -0.38
RAB39B-201ENST00000369454 ANO9A1A5B4 782 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 ZSCAN5CA6NGD5 496 aaPredicted RBP12.65□□□□□ -0.38
RAB39B-201ENST00000369454 AKAP3O75969 853 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 TATDN1Q6P1N9 297 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 ZBTB21Q9ULJ3 1066 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 MYO3BQ8WXR4 1341 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 TMCO5BA8MYB1 307 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 HOXD13P35453 343 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 ASIC2Q16515 512 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 WDR93Q6P2C0 686 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 DYDC2Q96IM9 177 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 TLR10Q9BXR5 811 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 IDI2Q9BXS1 227 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 FAM204AQ9H8W3 233 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 RBM12Q9NTZ6 932 aaKnown RBP12.65□□□□□ -0.38
RAB39B-201ENST00000369454 HYOU1Q9Y4L1 999 aa12.65□□□□□ -0.38
RAB39B-201ENST00000369454 YDJCA8MPS7 323 aa12.65□□□□□ -0.39
RAB39B-201ENST00000369454 RPA1P27694 616 aa12.65□□□□□ -0.39
RAB39B-201ENST00000369454 PAFAH1B1P43034 410 aa12.65□□□□□ -0.39
RAB39B-201ENST00000369454 STAT2P52630 851 aa12.65□□□□□ -0.39
RAB39B-201ENST00000369454 AP3B2Q13367 1082 aa12.65□□□□□ -0.39
RAB39B-201ENST00000369454 COG2Q14746 738 aa12.65□□□□□ -0.39
RAB39B-201ENST00000369454 KNOP1Q1ED39 458 aaKnown RBP12.65□□□□□ -0.39
RAB39B-201ENST00000369454 DNAJC21Q5F1R6 531 aaKnown RBP12.65□□□□□ -0.39
RAB39B-201ENST00000369454 CCDC70Q6NSX1 233 aa12.65□□□□□ -0.39
RAB39B-201ENST00000369454 AKT1S1Q96B36 256 aa12.65□□□□□ -0.39
RAB39B-201ENST00000369454 GLIS2Q9BZE0 524 aaPredicted RBP12.65□□□□□ -0.39
RAB39B-201ENST00000369454 RNF40O75150 1001 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 SERPING1P05155 500 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 XRCC5P13010 732 aaKnown RBP12.64□□□□□ -0.39
RAB39B-201ENST00000369454 GGCXP38435 758 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 PTK2Q05397 1052 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 HYIQ5T013 277 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 KLHDC7AQ5VTJ3 777 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 LRCH2Q5VUJ6 765 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 ANKRD31Q8N7Z5 1873 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 TUBB4BP68371 445 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 EXOC3L4Q17RC7 722 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 SYT2Q8N9I0 419 aaPredicted RBP12.64□□□□□ -0.39
RAB39B-201ENST00000369454 CEP63Q96MT8 703 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 NAP1L4Q99733 375 aaKnown RBP12.64□□□□□ -0.39
RAB39B-201ENST00000369454 PDGFDQ9GZP0 370 aaPredicted RBP12.64□□□□□ -0.39
RAB39B-201ENST00000369454 GLT8D2Q9H1C3 349 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 SCN9AQ15858 1988 aa12.64□□□□□ -0.39
RAB39B-201ENST00000369454 FAM13AO94988 1023 aa12.63□□□□□ -0.39
RAB39B-201ENST00000369454 SREBF1P36956 1147 aa12.63□□□□□ -0.39
RAB39B-201ENST00000369454 CYP2J2P51589 502 aa12.63□□□□□ -0.39
RAB39B-201ENST00000369454 ASTE1Q2TB18 679 aaPredicted RBP12.63□□□□□ -0.39
RAB39B-201ENST00000369454 MAP9Q49MG5 647 aa12.63□□□□□ -0.39
RAB39B-201ENST00000369454 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
RAB39B-201ENST00000369454 WDR18Q9BV38 432 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms