RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 BMP2KQ9NSY1 1161 aaPredicted RBP26.63■■□□□ 1.85
SNX3-203ENST00000368979 DIS3Q9Y2L1 958 aaKnown RBP26.63■■□□□ 1.85
SNX3-203ENST00000368979 GDAQ9Y2T3 454 aa26.63■■□□□ 1.85
SNX3-203ENST00000368979 PCDHA10Q9Y5I2 948 aa26.63■■□□□ 1.85
SNX3-203ENST00000368979 RASSF10A6NK89 507 aa26.62■■□□□ 1.85
SNX3-203ENST00000368979 SMTNL1A8MU46 457 aa26.62■■□□□ 1.85
SNX3-203ENST00000368979 ERCC5P28715 1186 aaPredicted RBP26.62■■□□□ 1.85
SNX3-203ENST00000368979 EHHADHQ08426 723 aa26.62■■□□□ 1.85
SNX3-203ENST00000368979 CRHR2Q13324 411 aa26.62■■□□□ 1.85
SNX3-203ENST00000368979 KCNV1Q6PIU1 500 aa26.62■■□□□ 1.85
SNX3-203ENST00000368979 ARMCX2Q7L311 632 aa26.62■■□□□ 1.85
SNX3-203ENST00000368979 EEPD1Q7L9B9 569 aa26.62■■□□□ 1.85
SNX3-203ENST00000368979 GTPBP4Q9BZE4 634 aaKnown RBP26.62■■□□□ 1.85
SNX3-203ENST00000368979 MYL5Q02045 173 aa26.61■■□□□ 1.85
SNX3-203ENST00000368979 CREBZFQ9NS37 354 aa26.61■■□□□ 1.85
SNX3-203ENST00000368979 ZBTB39O15060 712 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 ACTR2P61160 394 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 PSMC5P62195 406 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 NOGQ13253 232 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 GRM1Q13255 1194 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 NEDD9Q14511 834 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 UGCGQ16739 394 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 FBXO16Q8IX29 292 aaPredicted RBP26.6■■□□□ 1.85
SNX3-203ENST00000368979 C4orf19Q8IY42 314 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 TELO2Q9Y4R8 837 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 FRMD3A2A2Y4 597 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 CA12O43570 354 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 MORN1Q5T089 497 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 MAMDC4Q6UXC1 1216 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 ABHD15Q6UXT9 468 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 CYFIP1Q7L576 1253 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 ENOX1Q8TC92 643 aaKnown RBP26.6■■□□□ 1.85
SNX3-203ENST00000368979 ANP32BQ92688 251 aaKnown RBP26.6■■□□□ 1.85
SNX3-203ENST00000368979 MED15Q96RN5 788 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 RUSC1Q9BVN2 902 aa26.6■■□□□ 1.85
SNX3-203ENST00000368979 DDX41Q9UJV9 622 aaKnown RBP26.6■■□□□ 1.85
SNX3-203ENST00000368979 MCM3APO60318 1980 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 NPHP3-ACAD11A0A0J9YXS1 232 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 AP5Z1O43299 807 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 FARP2O94887 1054 aaPredicted RBP26.59■■□□□ 1.85
SNX3-203ENST00000368979 ATG7O95352 703 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 ARIH2O95376 493 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 PSAPP07602 524 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 IDEP14735 1019 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 GIT2Q14161 759 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 COBLL1Q53SF7 1204 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 RINT1Q6NUQ1 792 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 DPP9Q86TI2 863 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 ADSSL1Q8N142 457 aa26.59■■□□□ 1.85
SNX3-203ENST00000368979 DBR1Q9UK59 544 aaKnown RBP26.59■■□□□ 1.85
SNX3-203ENST00000368979 SYNGAP1Q96PV0 1343 aa26.58■■□□□ 1.85
SNX3-203ENST00000368979 PRCPP42785 496 aa26.58■■□□□ 1.85
SNX3-203ENST00000368979 APLP1P51693 650 aa26.58■■□□□ 1.85
SNX3-203ENST00000368979 STK4Q13043 487 aa26.58■■□□□ 1.85
SNX3-203ENST00000368979 COASYQ13057 564 aa26.58■■□□□ 1.85
SNX3-203ENST00000368979 DEFB115Q30KQ5 88 aa26.58■■□□□ 1.85
SNX3-203ENST00000368979 CCDC62Q6P9F0 684 aa26.58■■□□□ 1.85
SNX3-203ENST00000368979 MAML3Q96JK9 1138 aa26.58■■□□□ 1.85
SNX3-203ENST00000368979 PANK4Q9NVE7 773 aa26.58■■□□□ 1.85
SNX3-203ENST00000368979 WDR81Q562E7 1941 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 SORBS3O60504 671 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 ALDH1A1P00352 501 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 KRT18P05783 430 aaKnown RBP26.57■■□□□ 1.84
SNX3-203ENST00000368979 SUPT20HL2P0C7V6 817 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 PSMD2Q13200 908 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 LY6KQ17RY6 165 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 MIS18BP1Q6P0N0 1132 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 C1orf186Q6ZWK4 172 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 CCDC65Q8IXS2 484 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 KIAA0895Q8NCT3 520 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 CAPNS2Q96L46 248 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 REEP2Q9BRK0 252 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 HSD3B7Q9H2F3 369 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 VTA1Q9NP79 307 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 KCND2Q9NZV8 630 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 SYNRGQ9UMZ2 1314 aa26.57■■□□□ 1.84
SNX3-203ENST00000368979 GGPS1O95749 300 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 SP4Q02446 784 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 KLHL10Q6JEL2 608 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 METTL7BQ6UX53 244 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 TRMT44Q8IYL2 757 aaKnown RBP26.56■■□□□ 1.84
SNX3-203ENST00000368979 NPLOC4Q8TAT6 608 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 ATP6V0A1Q93050 837 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 KATNBL1Q9H079 304 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.56■■□□□ 1.84
SNX3-203ENST00000368979 GABBR1Q9UBS5 961 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 CTNND2Q9UQB3 1225 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 IGSF9BQ9UPX0 1349 aa26.56■■□□□ 1.84
SNX3-203ENST00000368979 DKC1O60832 514 aaKnown RBP eCLIP26.55■■□□□ 1.84
SNX3-203ENST00000368979 AOC2O75106 756 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 YWHABP31946 246 aaKnown RBP26.55■■□□□ 1.84
SNX3-203ENST00000368979 PPP1R2P41236 205 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 CACNB1Q02641 598 aaPredicted RBP26.55■■□□□ 1.84
SNX3-203ENST00000368979 MAP2K5Q13163 448 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 SARM1Q6SZW1 724 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 CCDC60Q8IWA6 550 aaPredicted RBP26.55■■□□□ 1.84
SNX3-203ENST00000368979 HPS3Q969F9 1004 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 SLC5A4Q9NY91 659 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 RWDD2AQ9UIY3 292 aa26.55■■□□□ 1.84
SNX3-203ENST00000368979 IGKV6D-21A0A0A0MT36 114 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms