RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ME1P48163 572 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 CDK7P50613 346 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 ADCY7P51828 1080 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 SMAD3P84022 425 aaKnown RBP9.94□□□□□ -0.82
SNX27-201ENST00000368838 NONOQ15233 471 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNX27-201ENST00000368838 CDC37Q16543 378 aaPredicted RBP9.94□□□□□ -0.82
SNX27-201ENST00000368838 TSR1Q2NL82 804 aaKnown RBP9.94□□□□□ -0.82
SNX27-201ENST00000368838 QRICH1Q2TAL8 776 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 TTC38Q5R3I4 469 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 RESP18Q5W5W9 173 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 LRSAM1Q6UWE0 723 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 C16orf59Q7L2K0 433 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 HEATR3Q7Z4Q2 680 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 TLK2Q86UE8 772 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 FMR1NBQ8N0W7 255 aaPredicted RBP9.94□□□□□ -0.82
SNX27-201ENST00000368838 KCTD17Q8N5Z5 321 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 C4orf32Q8N8J7 132 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 PCSK9Q8NBP7 692 aaKnown RBP9.94□□□□□ -0.82
SNX27-201ENST00000368838 MAFAQ8NHW3 353 aaPredicted RBP9.94□□□□□ -0.82
SNX27-201ENST00000368838 CUL5Q93034 780 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 CPVLQ9H3G5 476 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 CYP39A1Q9NYL5 469 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 USP25Q9UHP3 1055 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 FBXO2Q9UK22 296 aaPredicted RBP9.94□□□□□ -0.82
SNX27-201ENST00000368838 SCN10AQ9Y5Y9 1956 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 UMODL1Q5DID0 1318 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 VCANP13611 3396 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 CYP3A7-CYP3A51PA0A087WV96 503 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 A0A0U1RQG5 324 aaPredicted RBP9.93□□□□□ -0.82
SNX27-201ENST00000368838 ARVCFO00192 962 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 NFIBO00712 420 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 CYP3A7P24462 503 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 CST5P28325 142 aaPredicted RBP9.93□□□□□ -0.82
SNX27-201ENST00000368838 CIITAP33076 1130 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 GRIN2CQ14957 1233 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 FSCN1Q16658 493 aaKnown RBP9.93□□□□□ -0.82
SNX27-201ENST00000368838 EARS2Q5JPH6 523 aaKnown RBP9.93□□□□□ -0.82
SNX27-201ENST00000368838 CAVIN1Q6NZI2 390 aaKnown RBP9.93□□□□□ -0.82
SNX27-201ENST00000368838 CCDC73Q6ZRK6 1079 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 NEK8Q86SG6 692 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 FBXO11Q86XK2 927 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 FAM126BQ8IXS8 530 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 PTCD2Q8WV60 388 aaKnown RBP9.93□□□□□ -0.82
SNX27-201ENST00000368838 GPKOWQ92917 476 aaPredicted RBP eCLIP9.93□□□□□ -0.82
SNX27-201ENST00000368838 AK8Q96MA6 479 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 TOX2Q96NM4 488 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 FUCA2Q9BTY2 467 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 AP5M1Q9H0R1 490 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 CLSTN2Q9H4D0 955 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 PSTPIP2Q9H939 334 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 PCDHB6Q9Y5E3 794 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 PCDHA1Q9Y5I3 950 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 GRIN2DO15399 1336 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 ABCB11O95342 1321 aa9.93□□□□□ -0.82
SNX27-201ENST00000368838 hCG_1642624A0A1W2PR95 340 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 ASB14A6NK59 587 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 MEIS2O14770 477 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 TBX3O15119 743 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 ICAM1P05362 532 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 CYP3A4P08684 503 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 DNAJB2P25686 324 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
SNX27-201ENST00000368838 LONP1P36776 959 aaKnown RBP9.92□□□□□ -0.82
SNX27-201ENST00000368838 CCL23P55773 120 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 BAATQ14032 418 aaPredicted RBP9.92□□□□□ -0.82
SNX27-201ENST00000368838 FOXD4L6Q3SYB3 417 aaPredicted RBP9.92□□□□□ -0.82
SNX27-201ENST00000368838 MFSD5Q6N075 450 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 TAPT1Q6NXT6 567 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 KANK3Q6NY19 840 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 SHC4Q6S5L8 630 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 FOXD4L3Q6VB84 417 aaPredicted RBP9.92□□□□□ -0.82
SNX27-201ENST00000368838 SLC30A10Q6XR72 485 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 ZNF365Q70YC5 407 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 USP38Q8NB14 1042 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 PPM1EQ8WY54 764 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 FTOQ9C0B1 505 aaKnown RBP eCLIP9.92□□□□□ -0.82
SNX27-201ENST00000368838 TRPV6Q9H1D0 765 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 NUP62CLQ9H1M0 184 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 DACT1Q9NYF0 836 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 GNEQ9Y223 722 aaKnown RBP9.92□□□□□ -0.82
SNX27-201ENST00000368838 MRPL11Q9Y3B7 192 aaKnown RBP9.92□□□□□ -0.82
SNX27-201ENST00000368838 MROH7Q68CQ1 1323 aa9.92□□□□□ -0.82
SNX27-201ENST00000368838 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.91□□□□□ -0.82
SNX27-201ENST00000368838 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.91□□□□□ -0.82
SNX27-201ENST00000368838 TLR3O15455 904 aaKnown RBP9.91□□□□□ -0.82
SNX27-201ENST00000368838 LIG1P18858 919 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 SREBF1P36956 1147 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 MRE11P49959 708 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 ALDH5A1P51649 535 aaPredicted RBP9.91□□□□□ -0.82
SNX27-201ENST00000368838 CHMP4BP1P59074 171 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 PDIA5Q14554 519 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 TKFCQ3LXA3 575 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 USH1GQ495M9 461 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 TMEM240Q5SV17 173 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 L1TD1Q5T7N2 865 aaKnown RBP9.91□□□□□ -0.82
SNX27-201ENST00000368838 PIK3AP1Q6ZUJ8 805 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 TIFAQ96CG3 184 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 CCDC34Q96HJ3 373 aa9.91□□□□□ -0.82
SNX27-201ENST00000368838 CCSER1Q9C0I3 900 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms