RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CSF2RAP15509 400 aa20.93■□□□□ 0.94
CHTOP-202ENST00000368687 ABHD15Q6UXT9 468 aa20.93■□□□□ 0.94
CHTOP-202ENST00000368687 FBXO18Q8NFZ0 1043 aa20.93■□□□□ 0.94
CHTOP-202ENST00000368687 OXER1Q8TDS5 423 aa20.93■□□□□ 0.94
CHTOP-202ENST00000368687 TNFRSF25Q93038 417 aa20.93■□□□□ 0.94
CHTOP-202ENST00000368687 FOXP1Q9H334 677 aaPredicted RBP20.93■□□□□ 0.94
CHTOP-202ENST00000368687 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.93■□□□□ 0.94
CHTOP-202ENST00000368687 CCNT1O60563 726 aaKnown RBP20.92■□□□□ 0.94
CHTOP-202ENST00000368687 TDP2O95551 362 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 CCNE2O96020 404 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 SELPP16109 830 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 PPFIA1Q13136 1202 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 NR5A1Q13285 461 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 C9orf50Q5SZB4 431 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 TAF2Q6P1X5 1199 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 LMBR1Q8WVP7 490 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 CTAGE1Q96RT6 745 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 WNT8AQ9H1J5 351 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 RNPEPQ9H4A4 650 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 ZNF302Q9NR11 478 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 SAMM50Q9Y512 469 aa20.92■□□□□ 0.94
CHTOP-202ENST00000368687 BTBD18B2RXH4 712 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 EDIL3O43854 480 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 EPHB4P54760 987 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 CCL23P55773 120 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 GNL2Q13823 731 aaKnown RBP20.91■□□□□ 0.94
CHTOP-202ENST00000368687 WDR81Q562E7 1941 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 SLFN12Q8IYM2 578 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 ETNPPLQ8TBG4 499 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 FAM167AQ96KS9 214 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 RNPC3Q96LT9 517 aaKnown RBP20.91■□□□□ 0.94
CHTOP-202ENST00000368687 TRPC6Q9Y210 931 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 TELO2Q9Y4R8 837 aa20.91■□□□□ 0.94
CHTOP-202ENST00000368687 UMODL1Q5DID0 1318 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 POTEB3A0JP26 581 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 PSMD10O75832 226 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 BAG4O95429 457 aaKnown RBP20.9■□□□□ 0.94
CHTOP-202ENST00000368687 IQCF3P0C7M6 154 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 CKBP12277 381 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 MARK3P27448 753 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 ORC2Q13416 577 aaPredicted RBP20.9■□□□□ 0.94
CHTOP-202ENST00000368687 SHHQ15465 462 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 GRIK4Q16099 956 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 GPR153Q6NV75 609 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 PDXDC2PQ6P474 469 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 POTEBQ6S5H4 581 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 LRRC8DQ7L1W4 858 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 RSPH3Q86UC2 560 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 PPP1R13LQ8WUF5 828 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 PCYT2Q99447 389 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 DISC1Q9NRI5 854 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 SETD4Q9NVD3 440 aa20.9■□□□□ 0.94
CHTOP-202ENST00000368687 COL1A2P08123 1366 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 MARCH6O60337 910 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 HBP1O60381 514 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 ACTN1P12814 892 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 ADAM17P78536 824 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 RPAINQ86UA6 219 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 ATP8B4Q8TF62 1192 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 DHX38Q92620 1227 aaKnown RBP20.89■□□□□ 0.93
CHTOP-202ENST00000368687 KCNMB3Q9NPA1 279 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 TUBE1Q9UJT0 475 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 CEP131Q9UPN4 1083 aa20.89■□□□□ 0.93
CHTOP-202ENST00000368687 MAFBQ9Y5Q3 323 aaPredicted RBP20.89■□□□□ 0.93
CHTOP-202ENST00000368687 MBLAC1A4D2B0 266 aaPredicted RBP20.88■□□□□ 0.93
CHTOP-202ENST00000368687 TREHO43280 583 aa20.88■□□□□ 0.93
CHTOP-202ENST00000368687 SLC37A4O43826 429 aa20.88■□□□□ 0.93
CHTOP-202ENST00000368687 DTNBO60941 627 aa20.88■□□□□ 0.93
CHTOP-202ENST00000368687 CD2BP2O95400 341 aaKnown RBP20.88■□□□□ 0.93
CHTOP-202ENST00000368687 FGBP02675 491 aa20.88■□□□□ 0.93
CHTOP-202ENST00000368687 TRAPPC10P48553 1259 aa20.88■□□□□ 0.93
CHTOP-202ENST00000368687 FOSBP53539 338 aa20.88■□□□□ 0.93
CHTOP-202ENST00000368687 PLCB4Q15147 1175 aa20.88■□□□□ 0.93
CHTOP-202ENST00000368687 SWSAP1Q6NVH7 229 aa20.88■□□□□ 0.93
CHTOP-202ENST00000368687 CCDC60Q8IWA6 550 aaPredicted RBP20.88■□□□□ 0.93
CHTOP-202ENST00000368687 BBXQ8WY36 941 aaPredicted RBP20.88■□□□□ 0.93
CHTOP-202ENST00000368687 IGSF9BQ9UPX0 1349 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 THPOP40225 353 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 ZNF200P98182 395 aaPredicted RBP20.87■□□□□ 0.93
CHTOP-202ENST00000368687 PPP2R5CQ13362 524 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 TRIM71Q2Q1W2 868 aaKnown RBP20.87■□□□□ 0.93
CHTOP-202ENST00000368687 ZNF484Q5JVG2 852 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 TMEM240Q5SV17 173 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 MIER3Q7Z3K6 550 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 CKAP2LQ8IYA6 745 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 HERVK_113Q902F9 699 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 SCLYQ96I15 445 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.87■□□□□ 0.932e-9■□□□□ 10.2
CHTOP-202ENST00000368687 SMC3Q9UQE7 1217 aa20.87■□□□□ 0.93
CHTOP-202ENST00000368687 NEMFO60524 1076 aa20.86■□□□□ 0.93
CHTOP-202ENST00000368687 DKC1O60832 514 aaKnown RBP eCLIP20.86■□□□□ 0.93
CHTOP-202ENST00000368687 INSRRP14616 1297 aa20.86■□□□□ 0.93
CHTOP-202ENST00000368687 GUCY1B3Q02153 619 aa20.86■□□□□ 0.93
CHTOP-202ENST00000368687 EARS2Q5JPH6 523 aaKnown RBP20.86■□□□□ 0.93
CHTOP-202ENST00000368687 B3GNT9Q6UX72 402 aa20.86■□□□□ 0.93
CHTOP-202ENST00000368687 ZNF365Q70YC5 407 aa20.86■□□□□ 0.93
CHTOP-202ENST00000368687 Q7L0L9 218 aa20.86■□□□□ 0.93
CHTOP-202ENST00000368687 NOSTRINQ8IVI9 506 aa20.86■□□□□ 0.93
CHTOP-202ENST00000368687 UNC45AQ9H3U1 944 aa20.86■□□□□ 0.93
CHTOP-202ENST00000368687 NOL7Q9UMY1 257 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms