RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 PPIP5K2O43314 1243 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 ATP1A1P05023 1023 aaKnown RBP11.24□□□□□ -0.61
TPM3-209ENST00000368527 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 SPATA31C1P0DKV0 1188 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 XRCC5P13010 732 aaKnown RBP11.24□□□□□ -0.61
TPM3-209ENST00000368527 RFX1P22670 979 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 NR2F2P24468 414 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 SNRPFP62306 86 aaKnown RBP11.24□□□□□ -0.61
TPM3-209ENST00000368527 TNIP1Q15025 636 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 DLGAP5Q15398 846 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 ASIC2Q16515 512 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 SLC18A3Q16572 532 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 TDRD12Q587J7 1177 aaKnown RBP11.24□□□□□ -0.61
TPM3-209ENST00000368527 ARSHQ5FYA8 562 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 CCDC181Q5TID7 509 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 SLC17A8Q8NDX2 589 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 AGBL3Q8NEM8 1001 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 LMBR1Q8WVP7 490 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.24□□□□□ -0.61
TPM3-209ENST00000368527 SLC5A5Q92911 643 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 HPS3Q969F9 1004 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 LENG9Q96B70 501 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 NACC1Q96RE7 527 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 RIT2Q99578 217 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 TIPINQ9BVW5 301 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 LSM14BQ9BX40 385 aaKnown RBP11.24□□□□□ -0.61
TPM3-209ENST00000368527 LACRTQ9GZZ8 138 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 MAF1Q9H063 256 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 RANBP17Q9H2T7 1088 aaKnown RBP11.24□□□□□ -0.61
TPM3-209ENST00000368527 PRDM10Q9NQV6 1147 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 STK32BQ9NY57 414 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 VAV3Q9UKW4 847 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 INTUQ9ULD6 942 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 MYH7BA7E2Y1 1941 aa11.24□□□□□ -0.61
TPM3-209ENST00000368527 ZNF646O15015 1829 aaPredicted RBP11.23□□□□□ -0.61
TPM3-209ENST00000368527 ATAD5Q96QE3 1844 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 A0A0U1RQJ8 604 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
TPM3-209ENST00000368527 MSH4O15457 936 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 SEC31AO94979 1220 aaKnown RBP11.23□□□□□ -0.61
TPM3-209ENST00000368527 FAM13AO94988 1023 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 VIL1P09327 827 aaKnown RBP11.23□□□□□ -0.61
TPM3-209ENST00000368527 RHOXF2BP0C7M4 288 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 FDX1P10109 184 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 MAPTP10636 758 aaKnown RBP11.23□□□□□ -0.61
TPM3-209ENST00000368527 BCRP11274 1271 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 TNFRSF8P28908 595 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 OAS2P29728 719 aaKnown RBP11.23□□□□□ -0.61
TPM3-209ENST00000368527 PRKCIP41743 596 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 AARSP49588 968 aaKnown RBP eCLIP11.23□□□□□ -0.61
TPM3-209ENST00000368527 KLK7P49862 253 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 PRELPP51888 382 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 KCNMA1Q12791 1236 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 LRRC41Q15345 812 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 EPHA7Q15375 998 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 CLUL1Q15846 466 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 AOC3Q16853 763 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 CFAP221Q4G0U5 840 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 HGSNATQ68CP4 663 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 GBP6Q6ZN66 633 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 HS2ST1Q7LGA3 356 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 MCF2L2Q86YR7 1114 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 TMEM174Q8WUU8 243 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 ATRIPQ8WXE1 791 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 EIF2AK1Q9BQI3 630 aaKnown RBP11.23□□□□□ -0.61
TPM3-209ENST00000368527 RHOXF2Q9BQY4 288 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 TDRD3Q9H7E2 651 aaKnown RBP11.23□□□□□ -0.61
TPM3-209ENST00000368527 ZSWIM4Q9H7M6 989 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 VCPKMTQ9H867 229 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 CALCOCO1Q9P1Z2 691 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 PCDHB13Q9Y5F0 798 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 PSME4Q14997 1843 aa11.23□□□□□ -0.61
TPM3-209ENST00000368527 IGLV3-22A0A075B6J6 115 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 MACROD2A1Z1Q3 448 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 A6NNZ2 444 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 ZNF263O14978 683 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 PSMD10O75832 226 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 FLOT1O75955 427 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 SASH3O75995 380 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 GDF11O95390 407 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 ASNSP08243 561 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 FERP16591 822 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 CYP2C19P33261 490 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 PSMC2P35998 433 aaKnown RBP11.22□□□□□ -0.61
TPM3-209ENST00000368527 VSNL1P62760 191 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 CYP27A1Q02318 531 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 GHRHRQ02643 423 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 KLHL30Q0D2K2 578 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 KCNH2Q12809 1159 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 NNTQ13423 1086 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 CASP8Q14790 479 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 PPP2R5AQ15172 486 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 NAB2Q15742 525 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 EXOC3L4Q17RC7 722 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 TUBB8Q3ZCM7 444 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 LRCH2Q5VUJ6 765 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms