RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 NPLOC4Q8TAT6 608 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 FRS2Q8WU20 508 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 DIO2Q92813 273 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 MYOTQ9UBF9 498 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 APEX2Q9UBZ4 518 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 EMC9Q9Y3B6 208 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 PDPK1O15530 556 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 KNG1P01042 644 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 IFRD2Q12894 506 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 NFE2L2Q16236 605 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 PCSK4Q6UW60 755 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 MAMDC4Q6UXC1 1216 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 ZNF627Q7L945 461 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 JAZF1Q86VZ6 243 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 MKL1Q969V6 931 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 ZNF669Q96BR6 464 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 CCDC140Q96MF4 163 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 DEPDC7Q96QD5 511 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 OR14A2Q96R54 314 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 SRPK1Q96SB4 655 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 PRRX2Q99811 253 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 KANSL2Q9H9L4 492 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 HSPBP1Q9NZL4 362 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 OAZ3Q9UMX2 235 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 PTPN22Q9Y2R2 807 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 SLC30A1Q9Y6M5 507 aa5.21□□□□□ -1.58
ECHDC1-201ENST00000368287 ITGAVP06756 1048 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 CR2P20023 1033 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 HSP90AA2PQ14568 343 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 MTERF2Q49AM1 385 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 E4F1Q66K89 784 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 GTF2IRD2BQ6EKJ0 949 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 GTF2IRD2Q86UP8 949 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 PROSER1Q86XN7 944 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 TRIM59Q8IWR1 403 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 LRRC47Q8N1G4 583 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 ZNF513Q8N8E2 541 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 PHOSPHO1Q8TCT1 267 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 CLIP3Q96DZ5 547 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 SGSM3Q96HU1 749 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 CHAMP1Q96JM3 812 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 LGR4Q9BXB1 951 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 KATNBL1Q9H079 304 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 CYP26B1Q9NR63 512 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 ZFP69BQ9UJL9 534 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 FBXL7Q9UJT9 491 aa5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 REXO2Q9Y3B8 237 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-201ENST00000368287 H7BY64 318 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 MAFKO60675 156 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 CDC14BO60729 498 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 DGKIO75912 1065 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 ZNF888P0CJ79 500 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 BMP5P22003 454 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 HOXC12P31275 282 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 KCNAB2Q13303 367 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 RASGRF1Q13972 1273 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 CCDC142Q17RM4 750 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 SLC10A6Q3KNW5 377 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 SPATC1Q76KD6 591 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 ZNF227Q86WZ6 799 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 LILRB2Q8N423 598 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 ZNF808Q8N4W9 903 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 MRGPRX3Q96LB0 322 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 DNAJC7Q99615 494 aa5.19□□□□□ -1.58
ECHDC1-201ENST00000368287 DIAPH1O60610 1272 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 KCNJ6P48051 423 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 GLRBP48167 497 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 CCDC103Q8IW40 242 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 STPG3Q8N7X2 389 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 MRFAP1L1Q96HT8 127 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 IPO9Q96P70 1041 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 DPYSL5Q9BPU6 564 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 TTPALQ9BTX7 342 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 CARD11Q9BXL7 1154 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 NKX2-4Q9H2Z4 354 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 SMOC1Q9H4F8 434 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 EPB41L1Q9H4G0 881 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 PFDN2Q9UHV9 154 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 TBX22Q9Y458 520 aa5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 MRPL42Q9Y6G3 142 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-201ENST00000368287 A0A1W2PQU0 124 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 H0Y858 1186 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 MEFVO15553 781 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 CPP00450 1065 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 SNRPB2P08579 225 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 SSRP1Q08945 709 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 LSAMPQ13449 338 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 SKIDA1Q1XH10 827 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 NOP9Q86U38 636 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 BTN2A2Q8WVV5 523 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 SPATA9Q9BWV2 254 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 KCND1Q9NSA2 647 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 AURKAIP1Q9NWT8 199 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 CLDND1Q9NY35 253 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 ARHGAP20Q9P2F6 1191 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 ASH2LQ9UBL3 628 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 SHROOM4Q9ULL8 1493 aa5.17□□□□□ -1.58
ECHDC1-201ENST00000368287 CKMP06732 381 aa5.16□□□□□ -1.58
ECHDC1-201ENST00000368287 FBLP22087 321 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms