RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 RSPH10BP0C881 870 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 MYBP10242 640 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 EEF2P13639 858 aaKnown RBP13.53□□□□□ -0.24
PTPN7-202ENST00000367279 GCFC2P16383 781 aaKnown RBP13.53□□□□□ -0.24
PTPN7-202ENST00000367279 VPS72Q15906 364 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 DHX36Q9H2U1 1008 aaKnown RBP13.53□□□□□ -0.24
PTPN7-202ENST00000367279 PCDHAC2Q9Y5I4 1007 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 SBF2Q86WG5 1849 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
PTPN7-202ENST00000367279 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 RGL2O15211 777 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 XRCC5P13010 732 aaKnown RBP13.52□□□□□ -0.24
PTPN7-202ENST00000367279 HPDP32754 393 aaPredicted RBP13.52□□□□□ -0.24
PTPN7-202ENST00000367279 GABPAQ06546 454 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 TTMPQ5BVD1 217 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 CDC42EP5Q6NZY7 148 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 GJB7Q6PEY0 223 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.24
PTPN7-202ENST00000367279 TBCAO75347 108 aaKnown RBP13.52□□□□□ -0.24
PTPN7-202ENST00000367279 RPS6KA5O75582 802 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 GYS1P13807 737 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 SEPT2Q15019 361 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 CATSPER3Q86XQ3 398 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 EDEM3Q9BZQ6 932 aa13.52□□□□□ -0.24
PTPN7-202ENST00000367279 MYH7BA7E2Y1 1941 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 GRID2IPA4D2P6 1211 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 SNHG28P0DPA3 235 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 LIG3P49916 1009 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 TNNC1P63316 161 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 ARHGAP4P98171 946 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 TTC31Q49AM3 519 aaPredicted RBP13.52□□□□□ -0.25
PTPN7-202ENST00000367279 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 C15orf52Q6ZUT6 534 aaKnown RBP13.52□□□□□ -0.25
PTPN7-202ENST00000367279 ERMNQ8TAM6 284 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 CASKIN2Q8WXE0 1202 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 BHMT2Q9H2M3 363 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 IKZF4Q9H2S9 585 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 DBNDD1Q9H9R9 158 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 SWAP70Q9UH65 585 aa13.52□□□□□ -0.25
PTPN7-202ENST00000367279 GOLGB1Q14789 3259 aaKnown RBP13.52□□□□□ -0.25
PTPN7-202ENST00000367279 NDUFAB1O14561 156 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 RAD51CO43502 376 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 AFPP02771 609 aaKnown RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 PRPF4BQ13523 1007 aaKnown RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 ARSHQ5FYA8 562 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 DDX42Q86XP3 938 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 SPICE1Q8N0Z3 855 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 TEKT1Q969V4 418 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 CASP4P49662 377 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 CLK2P49760 499 aaKnown RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 CERKLQ49MI3 558 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 ZNF571Q7Z3V5 609 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 PIGOQ8TEQ8 1089 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 U2AF1L4Q8WU68 220 aaKnown RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 TMX4Q9H1E5 349 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 KCTD10Q9H3F6 313 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 UBXN2AP68543 259 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 ITIH3Q06033 890 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 PLS1Q14651 629 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 CEP85LQ5SZL2 805 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 MEI1Q5TIA1 1274 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 NAA35Q5VZE5 725 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 ALS2CLQ60I27 953 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 ALKBH5Q6P6C2 394 aaKnown RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 ADAT2Q7Z6V5 191 aaKnown RBP13.51□□□□□ -0.25
PTPN7-202ENST00000367279 TRIM31Q9BZY9 425 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 RGL1Q9NZL6 768 aa13.51□□□□□ -0.25
PTPN7-202ENST00000367279 CDK5RAP2Q96SN8 1893 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 GFPT2O94808 682 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 UCHL3P15374 230 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 MAGEA9P43362 315 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 KCNA1Q09470 495 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 TRMT1LQ7Z2T5 733 aaKnown RBP13.5□□□□□ -0.25
PTPN7-202ENST00000367279 KSR1Q8IVT5 923 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 CYP2W1Q8TAV3 490 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 KCNQ5Q9NR82 932 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 IGKV6D-41A0A0C4DH26 115 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 GOLGA6L10A6NI86 522 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 ABCB4P21439 1286 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 GUCY1A3Q02108 690 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 KNOP1Q1ED39 458 aaKnown RBP13.5□□□□□ -0.25
PTPN7-202ENST00000367279 SLFN12Q8IYM2 578 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 DDX47Q9H0S4 455 aaKnown RBP13.5□□□□□ -0.25
PTPN7-202ENST00000367279 GANQ9H2C0 597 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 GCNT4Q9P109 453 aa13.5□□□□□ -0.25
PTPN7-202ENST00000367279 CALUO43852 315 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 EPB41P11171 864 aaKnown RBP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 GIT2Q14161 759 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 CTTNQ14247 550 aaKnown RBP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 GLE1Q53GS7 698 aaKnown RBP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 MEX3CQ5U5Q3 659 aaKnown RBP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 PEX26Q7Z412 305 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 DAAM2Q86T65 1068 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 TPH2Q8IWU9 490 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 OR2W6PQ8NHA6 318 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 COA1Q9GZY4 146 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 BCS1LQ9Y276 419 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms