RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
H3F3A-202ENST00000366814 KRT18P05783 430 aaKnown RBP12.09□□□□□ -0.47
H3F3A-202ENST00000366814 PBX1P40424 430 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 PSMC4P43686 418 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 USP14P54578 494 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 UBXN1Q04323 297 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 E4F1Q66K89 784 aaPredicted RBP12.09□□□□□ -0.47
H3F3A-202ENST00000366814 NCAPH2Q6IBW4 605 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 NYAP1Q6ZVC0 841 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 GUF1Q8N442 669 aaKnown RBP12.09□□□□□ -0.47
H3F3A-202ENST00000366814 PRPF38AQ8NAV1 312 aaKnown RBP12.09□□□□□ -0.47
H3F3A-202ENST00000366814 KIF18AQ8NI77 898 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 PPP1R13BQ96KQ4 1090 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 ADGRA2Q96PE1 1338 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 OPLAHO14841 1288 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 GNRH1P01148 92 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 PLA2G4BP0C869 781 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 BCRP11274 1271 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 FCER1AP12319 257 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 HOXD10P28358 340 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 ADKP55263 362 aaKnown RBP12.08□□□□□ -0.48
H3F3A-202ENST00000366814 SOX10P56693 466 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 SETQ01105 290 aaPredicted RBP12.08□□□□□ -0.48
H3F3A-202ENST00000366814 LRRC63Q05C16 580 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 PTPN21Q16825 1174 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 ZNF592Q92610 1267 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 NUDT12Q9BQG2 462 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 SLF1Q9BQI6 1058 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 TMEM106CQ9BVX2 250 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 KIAA1683Q9H0B3 1180 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 SLC39A2Q9NP94 309 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 DNM3Q9UQ16 869 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 ZSWIM8A7E2V4 1837 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 LOC285556D6RIA3 1793 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 A0A1W2PQC6 194 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 LGALS16A8MUM7 142 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 FAM86B1E9PN63 330 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 MFAP3LO75121 409 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 ICAM1P05362 532 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 FAM86B2P0C5J1 330 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 RPA1P27694 616 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 GTF2F1P35269 517 aaKnown RBP eCLIP12.08□□□□□ -0.48
H3F3A-202ENST00000366814 MTIF2P46199 727 aaKnown RBP12.08□□□□□ -0.48
H3F3A-202ENST00000366814 DNM2P50570 870 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 IRX3P78415 501 aaPredicted RBP12.08□□□□□ -0.48
H3F3A-202ENST00000366814 RBL2Q08999 1139 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 FOXR2Q6PJQ5 311 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 MCF2L2Q86YR7 1114 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 ANKRD13CQ8N6S4 541 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 GJA10Q969M2 543 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 ASCC2Q9H1I8 757 aaPredicted RBP12.08□□□□□ -0.48
H3F3A-202ENST00000366814 PANK4Q9NVE7 773 aa12.08□□□□□ -0.48
H3F3A-202ENST00000366814 MGAMO43451 1857 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 MSH4O15457 936 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 FDX1P10109 184 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 PMS1P54277 932 aaKnown RBP12.07□□□□□ -0.48
H3F3A-202ENST00000366814 FCGRTP55899 365 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 TSR1Q2NL82 804 aaKnown RBP12.07□□□□□ -0.48
H3F3A-202ENST00000366814 ANKRD40Q6AI12 368 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 KCNK18Q7Z418 384 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 GPBP1Q86WP2 473 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 MYOCDQ8IZQ8 938 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 LENG9Q96B70 501 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 CNOT6LQ96LI5 555 aaKnown RBP12.07□□□□□ -0.48
H3F3A-202ENST00000366814 TUBGCP2Q9BSJ2 902 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 PTCH2Q9Y6C5 1203 aa12.07□□□□□ -0.48
H3F3A-202ENST00000366814 E9PMD0 336 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 CTGFP29279 349 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 CASP14P31944 242 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 STAT3P40763 770 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 GCLCP48506 637 aaPredicted RBP12.06□□□□□ -0.48
H3F3A-202ENST00000366814 PRMT2P55345 433 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 GOLGA8FQ08AF8 430 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 GOLGA8DPQ0D2H9 430 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 COASYQ13057 564 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 ECM1Q16610 540 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 FAM26FQ5R3K3 315 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 FKBP15Q5T1M5 1219 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 TMEM139Q8IV31 216 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 SAMD3Q8N6K7 520 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 MB21D1Q8N884 522 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 CPLX3Q8WVH0 158 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 IQCDQ96DY2 449 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 P2RX7Q99572 595 aaKnown RBP12.06□□□□□ -0.48
H3F3A-202ENST00000366814 DUSP9Q99956 384 aaKnown RBP12.06□□□□□ -0.48
H3F3A-202ENST00000366814 POLR3CQ9BUI4 534 aaPredicted RBP12.06□□□□□ -0.48
H3F3A-202ENST00000366814 NUP58Q9BVL2 599 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 TANGO6Q9C0B7 1094 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 EMILIN3Q9NT22 766 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 DOCK3Q8IZD9 2030 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 MED24O75448 989 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 SLC9C1Q4G0N8 1177 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 LRCH2Q5VUJ6 765 aa12.06□□□□□ -0.48
H3F3A-202ENST00000366814 IRF2BP1Q8IU81 584 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms